Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01338 ATGGCAAACGGCAAAGTCATTGTCGCTGGAGTATCTATCATTCTTGTTGTTGGTGTTGTCATTGGCACCGTTGCCGTTGTTAGCAACAACAACAGCAACGACCAATTGAAAACCCACAATAAGGCAGTTGACTCATTGTGCCAAAACGCAGATGACAAGAAACTTTGTTATGATGTCATTGGCAATGTCAACACCACAGACCCAAAGGATTACGTCTCAGAGGTGGTAAGGAAAACCTTGGACAGTGTCATCAAGGCATTCAACATGACTGATACCCTTTCCGTGGAGCACGGTCAGAGTAATCCAGGCATGAAGATGGCCCTTGAAGATTGCAAGGACTTGTTGCAATCAGCAATGCACGAACTGGAGGCCTCTATCAACCTTGTCACTGAGAACAACTTTGCAAGTGTTTACCAGAGTTCTGCAGAACTCAAAAACTGGTTGGGTGCCGTCATTGCCTACCAACAATCTTGCATGGACGGCTTTGACACCGAAGGTGAAAAGAAGGTCCAAACCGAGTTGCAATCTGACAGCTTGGACAGTGTTGGCAAACTCACTGGTCTTGCTCTTGATGTTGTTTCCGGATTGTCCCACTTCCTTAATGGTCTTGGTTTGAACTTGAACCTCAAACCCGCTTCTAGGAAGCTCCTTGAGGTGGATAATGAGGGATTCCCCACTTGGTTATCCGCCGCAGATCGCAAACTCTTGGCTAACATCGATAATGTCAAACCTAATGTTGTTGTTGCCAAGGATGGTAGTGGCCAATTTAAGACCGTCTTGGACGCAATTAACTCCTACCCCGCCAACTTCCAAGGTAGATACATTATCTATGTTAAGGCTGGCGTTTATGACGAATACATTACCGTTGACAAGAGGTGCAAGAACTTGCTTATCTATGGTGATGGAAATACAAGAACCATTATCACTGGTCGCAAGAACTTCCATGAGGGTACCAAGACAATGAGAACCGCCACATTCTCTTCCAATGCCGATGATTTCATTGCCAAGTCAATTGCATTCGAAAACACCGCTGGCGCCGAAGGTCACCAAGCAGTGGCACTCCGCGTGCAGGGAGATCGCTCAGCCTTCTTTGATTGCGCAATGCGTGGTTACCAAGATACACTTTATGCCCACGCCCACCGTCAGTTCTACCGCAACTGCGAAATCTCTGGTACCATTGACTTCATCTTCGGCTATGGTACCACCTTGATCCAAAACTCTAGGATCATTGTGAGGAAGCCCATGTCAAACCAGCAGAACATCGTGGTCGCCGATGGAACTGACCAGAAGAACATGCCTACTGGTATTGTCCTCCAAAATTGTGAGATCATGGCTGATGCCGCCCTCTACCCAGACAGGTTGACAGTGAGGACATTCTTGGCAAGGCCATGGAAGGCATTCTCAAGGGCAGTGTTCATTGAGAATAACATTGGTGACTTGATCCAGCCACAAGGTTATATCCCATGGAACCCACCAACTGAGGCTAACACTGACAATTGTTACTTTGCTGAGTTTGGAAACACTGGAGCTGGTGCCAACGCCGGAGCCAGGGCCAAATTTGCAAAAGGACTTATTAACAAGAATACTGCTGCTAAATATCTTGCTGAGCCATGGATTCAAGCTAGCACCTGGGTCCCAGCCACTGGCATTTCCTACGATGCTGGCTTCATCAAGGCTTAA 1680 0.472 MANGKVIVAGVSIILVVGVVIGTVAVVSNNNSNDQLKTHNKAVDSLCQNADDKKLCYDVIGNVNTTDPKDYVSEVVRKTLDSVIKAFNMTDTLSVEHGQSNPGMKMALEDCKDLLQSAMHELEASINLVTENNFASVYQSSAELKNWLGAVIAYQQSCMDGFDTEGEKKVQTELQSDSLDSVGKLTGLALDVVSGLSHFLNGLGLNLNLKPASRKLLEVDNEGFPTWLSAADRKLLANIDNVKPNVVVAKDGSGQFKTVLDAINSYPANFQGRYIIYVKAGVYDEYITVDKRCKNLLIYGDGNTRTIITGRKNFHEGTKTMRTATFSSNADDFIAKSIAFENTAGAEGHQAVALRVQGDRSAFFDCAMRGYQDTLYAHAHRQFYRNCEISGTIDFIFGYGTTLIQNSRIIVRKPMSNQQNIVVADGTDQKNMPTGIVLQNCEIMADAALYPDRLTVRTFLARPWKAFSRAVFIENNIGDLIQPQGYIPWNPPTEANTDNCYFAEFGNTGAGANAGARAKFAKGLINKNTAAKYLAEPWIQASTWVPATGISYDAGFIKA 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01338 559 Pfam Plant invertase/pectin methylesterase inhibitor 42 190 IPR006501 GO:0004857
Arst9g01338 559 NCBIfam pectinesterase inhibitor domain 24 172 IPR006501 GO:0004857
Arst9g01338 559 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 197 IPR035513 -
Arst9g01338 559 SMART PMEI_2 38 192 IPR006501 GO:0004857
Arst9g01338 559 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 194 IPR035513 -
Arst9g01338 559 Gene3D - 239 556 IPR012334 -
Arst9g01338 559 CDD PMEI-like_3 45 197 - -
Arst9g01338 559 FunFam Pectinesterase 39 197 - -
Arst9g01338 559 FunFam Pectinesterase 4 242 556 - -
Arst9g01338 559 Pfam Pectinesterase 245 541 IPR000070 GO:0030599|GO:0042545
Arst9g01338 559 SUPERFAMILY Pectin lyase-like 243 554 IPR011050 -
Arst9g01338 559 PANTHER PECTINESTERASE 16 546 - -
Arst9g01338 559 ProSitePatterns Pectinesterase signature 2. 389 398 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01338 Arst-Chr9 18861528 18863409 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01338 5 556 Carbohydrate Esterase AT5G49180 37.279 2.90e-127 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01338 K01051 - gmx:100808559 800.816