Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01332 ATGAAAGGAAAGGTAATAATTTCTGCCACCTGTCTCATCCTCGTGGTGGGTGTGGTCATCGGAGCGGTGCTTATTGCAAACAAGAAGGATGACTCCGGTGCTGACAACATTGAACTTCATGATAAGGCCATTGCCACAATGTGCCAAAACGTTCTCAACCAAACTCTTTGCCATGACATCTTGGGCCCAGTGAAGGGAACCACAGACCCCAATGAATTCATTGCGGCCGCAGTGAAAGCCGCCACGGAAAGCGTCATCAAGGCCTTGAACATGAGTGACAGGCTAACAGTTGAAAAAGGAAACGGCAGCCCAGGAATAAAGATGGCACTGGAGGATTGCAAAGACCTCTTGCAATCAGCCATGGACAGCCTCCAACTTTCAACATCGTTGGTGGACAGCAAGAATATCCAGAAAATTCATGACCAGTCCGCCGACTTCAAGAATTGGCTAGGCGCTGTCATCTCCTACCAACAAACTTGCCTCGACAACTTCAACGAAACCGACAGCGGCGAGAAAGTCATCAAGGAACAGCTTAACGCAGAGACCCTAGACCAAGTTATGACCACAACAGGACTCACTCTTGATATCCTCGCCGACTTGGACAGGATCCTCGACCAATTCAACTTGAAGATCGACGTCCACCCTGGCTCTCGCCGCCTTCTAGCCGCGGATGTCGATGACCAAGGGCTCCCGACCTGGCTCTCTGCCTCAGACCGGGACCTCTTGGCCGAAGTCGATGTCCACTTGGCTAAGAGACACCTCCTAGCGAAGGTAAAGGGCAAGGCTAAGGGTAAGGGTAAGGGCAAGGGCAAGGGAAAAGGTAAAGCTATTGTTGCTGGTGCTGTTGCGGGTGCTGCAGTTGGTGCTGCTGCCGGTGGTGATCAGGTTAAATTCTCTCCTGGATCCATTGAACCGGTGACTCGAGGACCAGCCCATGTGGTGGTTGCTCAGGATGGAAGTGGCCGATTCAGGACTATCAAGGAAGCTATTGATTCTTACCCACCTGGCTTCAAGGGTAGATACGTCATTTACGTTAAGGCTGGTGTCTATAATGAGTACATTATTATTCCTAAGCATGCTGTGAACATTCTTATGTACGGTGATGGCCCTACAAGGACTATTGTCACTGGTCGTAAGAACTTTGTTGAAGGCGTGAAAACAATGCATACCGCCACTTTTGCCAATACTGCTGATGGATTCATTGCTAAGGCAATGAGATTCGAAAACACCGCTGGTCCGAAAGGACACCAAGCTGTGGCACTTCGAAACCAGGGAGACAAATCAGCTTTCTTCCAATGCCATATCTTTGGTAATCAAGACACCTTGTACGTCCAAACCAACCGTCAATTCTACCGGGACTGCGAAATCTCCGGCACCATTGACTTCATCTTTGGCACATCTCCAGCCTTGATCCAAAACAGCAAGATCATCCTGAGGAAGCCTGATGATAAACAATTCAACACTGTAACTGCCGACGGCACAACGCAACCCAACATGCCCACCGGAATCGTCCTCCAGAACTGTGAGATTGTCCCAGAGCCTGCTCTGTTCCCTGCGAGGTTCACCACCAAGTCATACTTGGGTAGGCCATGGAAGCCTTACTCAAAGACACTGATTATGGAATCAATGATCAGCGATGCCATTCACCCAGAAGGGTGGTTTCCTTGGGCTGGAACCGTGCACCTTGATACTTTGTGGTATGCTGAGTATGCAAATACTGGACCTGGTGCCAATGTTCAAGGAAGGATTAAGTGGAAGGGTTATCATGGCCTCATTAGTAGGAATGAAGCTGCACGGTTCACTGCTGCTGAATTTCTCAGAGGTGGACCCCAAGGGCTTAAAAATCACTACTCTCAATGTTGGAAGAGATTTATAATGTTATTTGTACACTTAAATGGGTGTTTATCGGTTAAAATTTAG 1920 0.4875 MKGKVIISATCLILVVGVVIGAVLIANKKDDSGADNIELHDKAIATMCQNVLNQTLCHDILGPVKGTTDPNEFIAAAVKAATESVIKALNMSDRLTVEKGNGSPGIKMALEDCKDLLQSAMDSLQLSTSLVDSKNIQKIHDQSADFKNWLGAVISYQQTCLDNFNETDSGEKVIKEQLNAETLDQVMTTTGLTLDILADLDRILDQFNLKIDVHPGSRRLLAADVDDQGLPTWLSASDRDLLAEVDVHLAKRHLLAKVKGKAKGKGKGKGKGKGKAIVAGAVAGAAVGAAAGGDQVKFSPGSIEPVTRGPAHVVVAQDGSGRFRTIKEAIDSYPPGFKGRYVIYVKAGVYNEYIIIPKHAVNILMYGDGPTRTIVTGRKNFVEGVKTMHTATFANTADGFIAKAMRFENTAGPKGHQAVALRNQGDKSAFFQCHIFGNQDTLYVQTNRQFYRDCEISGTIDFIFGTSPALIQNSKIILRKPDDKQFNTVTADGTTQPNMPTGIVLQNCEIVPEPALFPARFTTKSYLGRPWKPYSKTLIMESMISDAIHPEGWFPWAGTVHLDTLWYAEYANTGPGANVQGRIKWKGYHGLISRNEAARFTAAEFLRGGPQGLKNHYSQCWKRFIMLFVHLNGCLSVKI 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01332 639 Pfam Pectinesterase 312 608 IPR000070 GO:0030599|GO:0042545
Arst9g01332 639 NCBIfam pectinesterase inhibitor domain 37 181 IPR006501 GO:0004857
Arst9g01332 639 Gene3D - 309 620 IPR012334 -
Arst9g01332 639 SMART PMEI_2 39 196 IPR006501 GO:0004857
Arst9g01332 639 Pfam Plant invertase/pectin methylesterase inhibitor 43 180 IPR006501 GO:0004857
Arst9g01332 639 SUPERFAMILY Pectin lyase-like 310 609 IPR011050 -
Arst9g01332 639 PANTHER PECTINESTERASE 14 611 - -
Arst9g01332 639 FunFam Pectinesterase 307 619 - -
Arst9g01332 639 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 203 IPR035513 -
Arst9g01332 639 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 174 IPR035513 -
Arst9g01332 639 ProSitePatterns Pectinesterase signature 2. 456 465 IPR033131 -
Arst9g01332 639 CDD PMEI-like_3 46 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01332 Arst-Chr9 18667577 18669962 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01332 2 608 Carbohydrate Esterase AT5G49180 35.656 5.00e-120 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01332 K01051 - gmx:100815015 622.854