Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01328 ATGAGTTGTTTTGGCTGTTGTGAAGAGGATGATTATGCCAAGTCAGTTGAAAATGGAGGACAATATGCCGTGAAAAACCCAGCAGGGAATAATGGAAACTATCATTCTTCTGAAACCGCAAAACCGCAGACCGTTAAAGTCCAACCCATTGAAGTTCCTGCTATACCGGCAGATGAACTAAAAGAAATTACAAATAATTTTGCACAAGAGGCTCTGGTTGGAGAGGGATCATATGGAAGAGTATATCATGCGGTTCTTAAAAGTGGGCAGGATGCTGCAATCAAGAAGTTAGATGCTAGTAAACAGCCTGATGATGAATTTTTGGCCCAAGTTTCAATGGTATCAAGGCTGAAGCATGAAAATTTTGTTCAGTTGCTTAGTTATTGTGTTGATGGAGGTTCCCGAGTTCTTGCTTATGAATTTGCTGCTAATGGGTCTCTTCATGATATCTTACATGGCAGAAAAGGTGTAAAAGGAGCAATACCTGGCCCAATTTTGACATGGGCACAGAGAGTGAAAATTGCTGTAGGGGCTGCAAGAGGGCTTGAATACTTGCATGAGAAGGCTGATCCCCACATTATCCACAGGGACATCAAATCAAGCAATGTACTAATCTTTGACGATGATGTTGCTAAAATTGCAGATTTTGATTTGTCAAATCAGGCTCCTGACATGGCTGCACGTCTTCATTCTACTCGTGTCCTTGGAACCTTTGGTTATCATGCACCAGAATATGCAATGACTGGGCAATTGAATGCTAAGAGTGATGTTTACAGTTTTGGTGTTGTCCTTCTGGAACTTTTGACTGGAAGGAAACCCGTTGATCATACACTACCACGTGGACAACAGAGTCTGGTTACTTGGGCTACACCAAGACTTAGCGAGGATAAAGTCAAGCAGTGTGTTGATCCGAAACTTGGAGCAGAATATCCACCCAAAGCAATTGCTAAGATGGCTGCTGTTGCTGCGTTGTGTGTTCAATATGAAGCTGATTTTAGACCAAACATGAGCATTGTAGTCAAAGCTCTTCAACCTTTGTTGACGGCACGACAGGGACCTCCTGGTGAAACACCAAATTAA 1080 0.4241 MSCFGCCEEDDYAKSVENGGQYAVKNPAGNNGNYHSSETAKPQTVKVQPIEVPAIPADELKEITNNFAQEALVGEGSYGRVYHAVLKSGQDAAIKKLDASKQPDDEFLAQVSMVSRLKHENFVQLLSYCVDGGSRVLAYEFAANGSLHDILHGRKGVKGAIPGPILTWAQRVKIAVGAARGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPRLSEDKVKQCVDPKLGAEYPPKAIAKMAAVAALCVQYEADFRPNMSIVVKALQPLLTARQGPPGETPN 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01328 359 MobiDBLite consensus disorder prediction 24 43 - -
Arst9g01328 359 SUPERFAMILY Protein kinase-like (PK-like) 42 343 IPR011009 -
Arst9g01328 359 PIRSF ILK 13 352 - -
Arst9g01328 359 Gene3D Transferase(Phosphotransferase) domain 1 143 352 - -
Arst9g01328 359 Pfam Protein tyrosine and serine/threonine kinase 71 343 IPR001245 GO:0004672|GO:0006468
Arst9g01328 359 FunFam pto-interacting protein 1 143 354 - -
Arst9g01328 359 ProSitePatterns Protein kinases ATP-binding region signature. 73 96 IPR017441 GO:0005524
Arst9g01328 359 SMART serkin_6 67 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g01328 359 FunFam PTI1-like tyrosine-protein kinase 3 31 141 - -
Arst9g01328 359 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Arst9g01328 359 Gene3D Phosphorylase Kinase; domain 1 28 141 - -
Arst9g01328 359 ProSiteProfiles Protein kinase domain profile. 67 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g01328 359 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 4 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01328 Arst-Chr9 18597313 18600735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01328 59 351 Receptor kinase-like Gene Family AT3G58690 49.153 8.16e-90 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Arst9g01328 PK_Tyr_Ser-Thr 2.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01328 K13436 - tcc:18613791 641.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g00748 6 6675822 6679281 Arst9g01328 9 18597313 18600735 PCT