Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01322 ATGGTGGCTGAAGCAGAGCTCGTGTGTCAACAGAGCGTGGCGTTGTTGGATGTGAAGTATTTTCCGAACAAAGGGACTGGAATTCACGAGATCGAAGACGTAGCACCCACTGCTATCTCGCCTCCGAGTTTTGACCGAGCTCGACCTTCTGAATCGGTCTCCGCTCAGTTACTCACTTCACAAGATGAAGCCAGACCTACCGATAGAATCTCAGATGCAGCTCTTGAAAATGCTGTTCTGCAATTTGTTCCCTGCATCCGTTCTGGTAGTTTTGCTGATATTGGGCCACGAAGATACATGGAAGATGAACATATAAGGATAGATGATTTGTCGTCTCACCTTGGATCACTGCACACCTTTCCTAAACCGAGTGCTTTCTACGGGGTTTTTGACGGTCATGGAGGACCTGAAGCTGCAGCTTATGTAAGAAAAAATGTAATAAAATTCTTCTTTGAGGATGGTAGTTTCCCACAGACATCTGAAGTAGATAATGTGTTTCTGGAAGAGGTTGAGAATTCCCTAAGGAAAGCATTTCTTTCAGCTGACTCAGCATTGGCTGATGATTGCAGTGTGAACACGTCATCAGGCACCACGGCTCTCACTGCATTGGTGCTTGGAAGGCTTCTGATGGTGGCCAATGCTGGTGATTGCCGGGCAGTTCTCTGTCGTAAAGGAGAGGCCATTGACATGTCTCAAGATCACAGGCCTATATATGCATCAGAGCGGAGGCGAGTTGAAGAATTGGGCGGTTACATAGAAGATGGTTACCTTAATGGGGTTCTCTCCGTTACTCGAGCCCTAGGTGACTGGGACATGAAGTTACCAAAGGGTTCTTCCTCCCCTTTGATTGCAGAGCCTGAGTTCCGACAAATGGTCCTAACAGAGGACGACGAATTCCTCATCATAGGGTGTGATGGCATCTGGGATGTGATGTCAAGTCAGCATGCAGTTAGCCTTGTTCGCAAAGGTCTGAGGCGACACGATGACCCTGATAAATGTGCAAGGGACCTCGTCATGGAGGCATTGCGCTTGAACACATTTGACAACCTCACTGTTATCATTGTTTGCTTCTCTTCCCTTGACAACAATGAGTCCTCTACACCTCCGTCTCCACCTTGCCAGCGGAAAATTAGATGTTGCAGCCTCTCTGCAGAGGCTCTTTGTAGCTTGAGGAGTTTATTGGAAGGGAGTGCCAGCAACTAA 1203 0.4771 MVAEAELVCQQSVALLDVKYFPNKGTGIHEIEDVAPTAISPPSFDRARPSESVSAQLLTSQDEARPTDRISDAALENAVLQFVPCIRSGSFADIGPRRYMEDEHIRIDDLSSHLGSLHTFPKPSAFYGVFDGHGGPEAAAYVRKNVIKFFFEDGSFPQTSEVDNVFLEEVENSLRKAFLSADSALADDCSVNTSSGTTALTALVLGRLLMVANAGDCRAVLCRKGEAIDMSQDHRPIYASERRRVEELGGYIEDGYLNGVLSVTRALGDWDMKLPKGSSSPLIAEPEFRQMVLTEDDEFLIIGCDGIWDVMSSQHAVSLVRKGLRRHDDPDKCARDLVMEALRLNTFDNLTVIIVCFSSLDNNESSTPPSPPCQRKIRCCSLSAEALCSLRSLLEGSASN 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01322 400 Pfam Protein phosphatase 2C 97 349 IPR001932 -
Arst9g01322 400 MobiDBLite consensus disorder prediction 47 63 - -
Arst9g01322 400 ProSitePatterns PPM-type phosphatase domain signature. 126 134 IPR000222 GO:0043169
Arst9g01322 400 FunFam Probable protein phosphatase 2C 22 71 360 - -
Arst9g01322 400 CDD PP2Cc 86 357 IPR001932 -
Arst9g01322 400 ProSiteProfiles PPM-type phosphatase domain profile. 87 357 IPR001932 -
Arst9g01322 400 SMART PP2C_SIG_2 102 357 IPR001932 -
Arst9g01322 400 SMART PP2C_4 77 355 IPR001932 -
Arst9g01322 400 MobiDBLite consensus disorder prediction 39 63 - -
Arst9g01322 400 Gene3D - 73 364 IPR036457 -
Arst9g01322 400 PANTHER PROTEIN PHOSPHATASE 2C 72 355 IPR015655 GO:0004722|GO:0006470
Arst9g01322 400 SUPERFAMILY PP2C-like 81 359 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01322 Arst-Chr9 18435450 18438173 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01322 100 396 PP2C-type Phosphatase Gene Family AT3G62260 71.477 6.56e-157 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01322 K14803 - gmx:100819791 682.945