Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01307 ATGGATGTTAATGTTATTAAGAAAAGTGAAGGGTCACAGGTGCAACAACTTGCAAACGAGATGGGACTAAGAAAAGGTCCATGGACGGTTGACGAGGACGCCATTCTCACCAATTACATCTCCACACACGGTGAGGGTCACTGGAATTCCGTCGCACGTTCTGCAGGATTGAAGAGAAGCGGTAAAAGCTGCAGATTAAGGTGGCTAAACTACTTGCGCCCCGACGTGCGCCGTGGAAATATCACACTCCAAGAACAGATATTGATTCTTGACCTCCACTTCCGGTGGGGCAATAGGTGGTCAAAGATTGCTCAGCACCTGCCAGGAAGAACGGACAACGAAATCAAGAATTACTGGAGGACGAGGGTGATAAAGCAGGCGAAGCAGTTAAAGTGCGATGTTAACAGCAAGCAGTTTAGAGACGCCTTGCGTTACGTGTGGATGCCGCGATTGCTCGAGAGGCTCCACCCTGCACCACAAAAACTCACTAACCAAACCGAACCTGAAACCCAAACCGGAGTTCTTGTTTCTAACCGAAACGGTTCAGATTCCGGACCTTTACTGTGCGCGAAACAGAGCAACTGCCTATCGGACTCGTCGTCGGGACAGAGTGTGAGTGTGGGAAATCAATGGTCAAGTTTCAATAATCAGTTGTTGTTTGAACAGGGGACAAATGAAAATGGACATGGTTGTGGTGGTGGTGGTGAGTCACTAGAGTGTTTGTGGAATGATGAGAATGTGTGGTTCTTGCAACAACAACTTTGCGATGATCTTGAAGTGAAATTCAATTCTCTTGCGTGA 801 0.4757 MDVNVIKKSEGSQVQQLANEMGLRKGPWTVDEDAILTNYISTHGEGHWNSVARSAGLKRSGKSCRLRWLNYLRPDVRRGNITLQEQILILDLHFRWGNRWSKIAQHLPGRTDNEIKNYWRTRVIKQAKQLKCDVNSKQFRDALRYVWMPRLLERLHPAPQKLTNQTEPETQTGVLVSNRNGSDSGPLLCAKQSNCLSDSSSGQSVSVGNQWSSFNNQLLFEQGTNENGHGCGGGGESLECLWNDENVWFLQQQLCDDLEVKFNSLA 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01307 266 SUPERFAMILY Homeodomain-like 22 119 IPR009057 -
Arst9g01307 266 ProSiteProfiles Myb-like domain profile. 20 72 IPR001005 -
Arst9g01307 266 Gene3D - 25 77 - -
Arst9g01307 266 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 20 76 IPR017930 -
Arst9g01307 266 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 77 127 IPR017930 -
Arst9g01307 266 CDD SANT 27 72 IPR001005 -
Arst9g01307 266 FunFam Myb transcription factor 25 77 - -
Arst9g01307 266 SMART sant 77 125 IPR001005 -
Arst9g01307 266 SMART sant 24 74 IPR001005 -
Arst9g01307 266 Gene3D - 82 123 - -
Arst9g01307 266 Pfam Myb-like DNA-binding domain 78 121 IPR001005 -
Arst9g01307 266 Pfam Myb-like DNA-binding domain 25 72 IPR001005 -
Arst9g01307 266 FunFam MYB transcription factor 82 145 - -
Arst9g01307 266 CDD SANT 82 121 IPR001005 -
Arst9g01307 266 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 20 200 IPR044676 GO:0003700|GO:0006355|GO:0043565
Arst9g01307 266 ProSiteProfiles Myb-like domain profile. 73 123 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01307 Arst-Chr9 17809119 17810681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01307 23 257 MYB Transcription Factor Family AT2G47190 51.575 4.63e-78 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst9g01307 Myb_DNA-binding 5.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01307 K09422 - gmx:778065 308.916