Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01306 ATGGAGATGGAGTACACAAGCAGTGTTCACATGATCATGAGAAGTTTATCGGATTGTGGCTCTTCGGTAGCAAATGGGAGCGAGGAAGACATGGAAATTAGAAAAGGTCCATGGACAGAGGAAGAGGATTCTGCTCTGTTGAACCATATCACCACCTATGGTGAAGGACACTGGAACTCTGTTGCACGCTCTGCAGGTCTAAAACGAAGCGGGAAAAGCTGCAGATTAAGATGGTTAAATTACTTGCGTCCGAATGTTAGACGTGGGAACATCACCCTCGAAGAACAACTCTTGATTCTTGACCTCCATTCGCGATGGGGCAATAGGTGGTCGAAAATAGCCGAACAATTGCCTGGAAGAACAGACAACGAGATCAAGAACTACTGGAGAACGAGAGTGGTGAAGCAGGCGAAGCAACTAAAATGCGACGTCAACAGCAAACAGTTCAGAGACGCGTTGCGCTACGTATGGATGCCGCGCCTTATGGAGCAGATTCAAGCACAAGGAAGATCCACCATGTGCGTCTCCCAAGCTCGCGAGATAGTTAATCCTGTCACTTCAGTTTCGACGGCTTCGTCTAAATCTTGCTCTTCATTCTCAGGATGTGAACAATTCCAAGCCTCTTCTTCAGTCTCTGATTCTTGTGTGTCTTATTACAGTTTAATGGGTAGTGGAAGTGGTGCTGGTTCTTCAGAGCGTGTGGAAAAGGGAGCCACGTCATCATCCACGCCATTTGAACCGGAAAATGGTTTCGGGGGTGCTGATTTTTGGACTGATGAAAACATATGGTTCTTGCAGCAGCAACTTGCTGATGACGATCATCTTTGA 828 0.4686 MEMEYTSSVHMIMRSLSDCGSSVANGSEEDMEIRKGPWTEEEDSALLNHITTYGEGHWNSVARSAGLKRSGKSCRLRWLNYLRPNVRRGNITLEEQLLILDLHSRWGNRWSKIAEQLPGRTDNEIKNYWRTRVVKQAKQLKCDVNSKQFRDALRYVWMPRLMEQIQAQGRSTMCVSQAREIVNPVTSVSTASSKSCSSFSGCEQFQASSSVSDSCVSYYSLMGSGSGAGSSERVEKGATSSSTPFEPENGFGGADFWTDENIWFLQQQLADDDHL 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01306 275 SMART sant 87 135 IPR001005 -
Arst9g01306 275 SMART sant 34 84 IPR001005 -
Arst9g01306 275 MobiDBLite consensus disorder prediction 224 247 - -
Arst9g01306 275 SUPERFAMILY Homeodomain-like 32 129 IPR009057 -
Arst9g01306 275 CDD SANT 92 131 IPR001005 -
Arst9g01306 275 FunFam Myb transcription factor 35 87 - -
Arst9g01306 275 Gene3D - 35 87 - -
Arst9g01306 275 ProSiteProfiles Myb-like domain profile. 83 133 IPR001005 -
Arst9g01306 275 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 30 86 IPR017930 -
Arst9g01306 275 MobiDBLite consensus disorder prediction 224 250 - -
Arst9g01306 275 ProSiteProfiles Myb-like domain profile. 30 82 IPR001005 -
Arst9g01306 275 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 29 209 IPR044676 GO:0003700|GO:0006355|GO:0043565
Arst9g01306 275 Gene3D - 92 172 - -
Arst9g01306 275 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 87 137 IPR017930 -
Arst9g01306 275 FunFam MYB transcription factor 92 155 - -
Arst9g01306 275 Pfam Myb-like DNA-binding domain 88 131 IPR001005 -
Arst9g01306 275 Pfam Myb-like DNA-binding domain 35 82 IPR001005 -
Arst9g01306 275 CDD SANT 37 82 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01306 Arst-Chr9 17799085 17800550 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01306 28 272 MYB Transcription Factor Family AT2G47190 52.140 4.62e-86 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst9g01306 Myb_DNA-binding 9.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01306 K09422 - gmx:100777932 315.464