Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01301 ATGGCTGTCAAAACCCGTTTCCAAGTGATTATGATGATGATCACTGTGTTCCTTCTTTCATCTTTATGCATCGCTTTGGGAACCAAATTAAAAGTTGTTGGAGGTAGTGGTCCGGATTTAAGGCTTAGAGATGCTGAGAGTAACAAAGTTAGAATAACGGTAAGTCAAGACGGTGCTGGTGACTTCAAGACCGTTACAGAAGCTGTTAATAGCATCCCTCAATGGAACAATAGGAGATTCATTCTGTACATTGCACCAGGTATTTATAGGGAGAAGATAATGATCCCAAGAACGCTTCCTTTTGTTACATTCTTAGGAGATGCTAGTGATCCACCAACAATTACAGGGAATGATACAGCTTCTATCGTTGGAAGAAATGGAAAACCAATTGGCACTTTCCAGAGTGCAACAGTTGCCGTCGACGCTAACTATTTTCTTGCCATCAACATCAAATTTGAGAACACAGCTGCACACTGGATTGGAAGGAGAGGGGAACAAGGAGTGGCGCTTCGAATTTCAGGGACCAAAGCTGCATTTTACAATTGCACATTCTATGGCGCTCAGGACACACTATATGATCACAAAGGCCTTCATTACTTCAACAATTGCCTCATTCAAGGTTCTGTTGATTTCATCTTCGGCTCTGGCAGGTCCCTTTACGAGAACTGCTATCTAAATTCCACAACAAGGAAGGTGGCTTCCATCACAGCTCAAAAGCGAACAAATTCATCAATGGAGAGTGGATTTTCGTTCAAAAACTGCACAGTCACAGGGAGTGGCCAAGTTTTTCTTGGACGAGCATGGGGCGAGTATTCAACGGTTGTTTTCTCTTACACCTTCATGGACAAAATTGTCCTTTCACAAGGATGGAGTGACTGGGGTGATCAAAAGCGCGACTTGAGAGTATATTATGGAGAATACAAGTGTAGTGGCCCTGGGGCTAATTTGACTGGAAGAGTTCCATGGGCAAGGATGCTTACAGATGAAGAGGCCAAGCCCTTCACTGGAATTCAATTTATTGAAGGAGATTCTTGGCTCATCAGCCCCTGA 1050 0.4343 MAVKTRFQVIMMMITVFLLSSLCIALGTKLKVVGGSGPDLRLRDAESNKVRITVSQDGAGDFKTVTEAVNSIPQWNNRRFILYIAPGIYREKIMIPRTLPFVTFLGDASDPPTITGNDTASIVGRNGKPIGTFQSATVAVDANYFLAINIKFENTAAHWIGRRGEQGVALRISGTKAAFYNCTFYGAQDTLYDHKGLHYFNNCLIQGSVDFIFGSGRSLYENCYLNSTTRKVASITAQKRTNSSMESGFSFKNCTVTGSGQVFLGRAWGEYSTVVFSYTFMDKIVLSQGWSDWGDQKRDLRVYYGEYKCSGPGANLTGRVPWARMLTDEEAKPFTGIQFIEGDSWLISP 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01301 349 ProSitePatterns Pectinesterase signature 2. 205 214 IPR033131 -
Arst9g01301 349 Pfam Pectinesterase 52 343 IPR000070 GO:0030599|GO:0042545
Arst9g01301 349 Gene3D - 46 348 IPR012334 -
Arst9g01301 349 FunFam Pectinesterase 47 348 - -
Arst9g01301 349 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 39 346 - -
Arst9g01301 349 SUPERFAMILY Pectin lyase-like 50 346 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01301 Arst-Chr9 17710267 17728625 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01301 52 346 Carbohydrate Esterase AT5G47500 48.148 1.58e-95 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01301 K01051 - qsu:112011696 523.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g01301 9 17710267 17728625 Arst9g01301 9 17710267 17728625 ECH