Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01300 ATGGCTGTCAAAACCCGTTTCCAAGTGATTATGATGATGATCACTGTGTTCCTTCTTTCATCTTTATGCATCGCTTTGGGAACCAAATTAAAAGTTGTTGGAGGTAGTGGTCCGGATTTAAGGCTTAGAGATGCTGAGAGTAACAAAGTTAGAATAACGGTAAGTCAAGACGGTGCTGGTGACTTCAAGACCGTTACAGAAGCTGTTAATAGCATCCCTCAATGGAACAATAGGAGATTCATTCTGTACATTGCACCAGGAGATGCTAGTGATCCACCAACAATTACAGGGAATGATACAGCTTCTATCGTTGGAAGAAATGGAAAACCAATTGGCACTTTCCAGAGTGCAACAGTTGCCGTCGACGCTAACTATTTTCTTGCCATCAACATCAAATTTGAGAACACAGCTGCACACTGGATTGGAAGGAGAGGGGAACAAGGAGTGGCGCTTCGAATTTCAGGGACCAAAGCTGCATTTTACAATTGCACATTCTATGGCGCTCAGGACACACTATATGATCACAAAGGCCTTCATTACTTCAACAATTGCCTCATTCAAGGTTCTGTTGATTTCATCTTCGGCTCTGGCAGGTCCCTTTACGAGAACTGCTATCTAAATTCCACAACAAGGAAGGTGGCTTCCATCACAGCTCAAAAGCGAACAAATTCATCAATGGAGAGTGGATTTTCGTTCAAAAACTGCACAGTCACAGGGAGTGGCCAAGTTTTTCTTGGACGAGCATGGGGCGAGTATTCAACGGTTGTTTTCTCTTACACCTTCATGGACAAAATTGTCCTTTCACAAGGATGGAGTGACTGGGGTGATCAAAAGCGCGACTTGAGAGTATATTATGGAGAATACAAGTGTAGTGGCCCTGGGGCTAATTTGACTGGAAGAGTTCCATGGGCAAGGATGCTTACAGATGAAGAGGCCAAGCCCTTCACTGGAATTCAATTTATTGAAGGAGATTCTTGGCTCATCAGCCCCTGA 993 0.4391 MAVKTRFQVIMMMITVFLLSSLCIALGTKLKVVGGSGPDLRLRDAESNKVRITVSQDGAGDFKTVTEAVNSIPQWNNRRFILYIAPGDASDPPTITGNDTASIVGRNGKPIGTFQSATVAVDANYFLAINIKFENTAAHWIGRRGEQGVALRISGTKAAFYNCTFYGAQDTLYDHKGLHYFNNCLIQGSVDFIFGSGRSLYENCYLNSTTRKVASITAQKRTNSSMESGFSFKNCTVTGSGQVFLGRAWGEYSTVVFSYTFMDKIVLSQGWSDWGDQKRDLRVYYGEYKCSGPGANLTGRVPWARMLTDEEAKPFTGIQFIEGDSWLISP 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01300 330 Gene3D - 46 329 IPR012334 -
Arst9g01300 330 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 39 327 - -
Arst9g01300 330 Pfam Pectinesterase 52 324 IPR000070 GO:0030599|GO:0042545
Arst9g01300 330 ProSitePatterns Pectinesterase signature 2. 186 195 IPR033131 -
Arst9g01300 330 SUPERFAMILY Pectin lyase-like 50 327 IPR011050 -
Arst9g01300 330 FunFam Pectinesterase 46 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01300 Arst-Chr9 17710265 17728627 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01300 52 327 Carbohydrate Esterase AT5G47500 44.781 4.07e-81 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01300 K01051 - qsu:112011696 477.248