Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01286 ATGGTGAGCGAGCGTTTCTCTCCAACAGGTTTCAATCTCAACGGAATCCTCGACGGTTATGGTTCAATACAAGAAGAGCATGTTGAGTTTCGAGTCGAAGATACCACCAACACCTCAACAATAACGAAATTTCTTGGAGACATGAATAACAATAATCCAATCCCTTATAATGAGAAAAACGAGCCCCAGCAACATGATGATTTCAAGTTTGATAACTTGGTGCTAGAAGAGTTCAGCTTTTACCCTGATCCACATCAAAAGACACAACCATTATTATTGCCACAAAAGAATAATAATCAATCGTTGGTCAGAAAAATAAGTTCGGTTGAACCACCACGGTCGCCACCTCCGCCTCCTTCATGGGAGCTCCTCTGCAGTTACGGAAGCAGGATCCAGAGGTTAGGACGGAGAAACTTAAGCGGCGCCAGCGAAGAAGCGAAAACTAGCACTAGCATTAGTCCCCAGAAGTTATCAACAGAGGAAATAGTAAGATTGGCAGGAACAAGGTATGTGCAATACTCTTCACAATGGCAAGATAATTGGTTCATGCCAATGCATCCTTATGCTCAAATTGGTTTCATGATTTTGTCTGAAGAGGAAAATAGGGACATTGACCTTGCCCAATTTCTCCTAGCTTCAGCTGATAAGATTGGGTGCCAACAATTCGAGCGTGCGAATTCATTGCTCCTTCAATGCCAATGGAATTCATCAAATCTTGGGAACACAGTTCAGAGACTCGTCTTTCATTTCTCTTGCGCACTGAAAGAAAGGCTGAATAGAGAGATAGGAGGGATGGTGTTAGAGAGGAATTCGCAGAGGGAACTGGTTGAAGCAATGCAAATGGATCATAACTCGGCGATTGCATGCCATCAAAAGCTTCCTTTTAATCAAGTGATGCAATTTGTTGGTGTGCAAGCTTTGGTTGAGCATGTTGCATCAAAAACCAAAATCCATTTGATAGATCTTGGGCTTGGATATGGGCTGATGGCGACAGTTCTTATGCAAGCTCTGGCCGAGCGAAGCGAAAAGCCGGTCGAGCTTGTGAAGATAACTGCCGTTGGATGTGGAAGCAAGAGGGTGCTAGATGAGGCAGGGAGGAGGTTGGTGAGTTTTGCCAAGTCCTTGAAGTTTCGCATTTTGTTTAAGACAGTTTTTGTTGAAGACATTACAGAATTAAGGGAAGATCATTTTGAGATTGAAAATGATGAAGCTGTGGCCGTGTACTCTCCCAATACCCTGAGGATTTTGGTGCCAAGTCCTGATTCCTTGGACAACTTGATGAGGGTGTTAAGGAAGATTAAACCGGCTATTATGGTTGTTGTTGAGATTGAAGCAAACCACAACTCTCCTTTATTTGTGAATCGATTCATTGAGTCCTTGTTTTTCTTTTCAGCATATTTTGATTGCATTGAAACGTGTCTAAATCAGGAGAATGAGTGCAGGATGAGATTAGAAGCAATATTATCTGAAGCAATACGAAACATTGTTGCATTGGATGACAAAGAGAGAGCAGCTAGGAATGTGAAGATACATGTTTGGAGAAGGTTTTTTGCGAGATTTAGAATGTTTGAAACTGAATTTAGTGAGTCATCGGTATACCAAGGTAACTTGGTTATTAAAAAGCTTGGGTTGAGTAACATTTGCACGTTAGATAAGAATGGAAAGAGTCTTATCATTGGATGGAAGGGGACCCCAATTCACTCCATCTCAGCATGGAAGTTTCTTTAA 1728 0.4184 MVSERFSPTGFNLNGILDGYGSIQEEHVEFRVEDTTNTSTITKFLGDMNNNNPIPYNEKNEPQQHDDFKFDNLVLEEFSFYPDPHQKTQPLLLPQKNNNQSLVRKISSVEPPRSPPPPPSWELLCSYGSRIQRLGRRNLSGASEEAKTSTSISPQKLSTEEIVRLAGTRYVQYSSQWQDNWFMPMHPYAQIGFMILSEEENRDIDLAQFLLASADKIGCQQFERANSLLLQCQWNSSNLGNTVQRLVFHFSCALKERLNREIGGMVLERNSQRELVEAMQMDHNSAIACHQKLPFNQVMQFVGVQALVEHVASKTKIHLIDLGLGYGLMATVLMQALAERSEKPVELVKITAVGCGSKRVLDEAGRRLVSFAKSLKFRILFKTVFVEDITELREDHFEIENDEAVAVYSPNTLRILVPSPDSLDNLMRVLRKIKPAIMVVVEIEANHNSPLFVNRFIESLFFFSAYFDCIETCLNQENECRMRLEAILSEAIRNIVALDDKERAARNVKIHVWRRFFARFRMFETEFSESSVYQGNLVIKKLGLSNICTLDKNGKSLIIGWKGTPIHSISAWKFL 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01286 575 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 156 563 IPR005202 -
Arst9g01286 575 Pfam GRAS domain family 207 573 IPR005202 -
Arst9g01286 575 ProSiteProfiles GRAS family profile. 197 573 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01286 Arst-Chr9 17080427 17082154 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01286 194 574 GRAS Transcription Factor Family AT1G66350 26.702 9.34e-43 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Arst9g01286 GRAS 7.2e-73 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01286 - - aip:107615215 1105.51