Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01263 ATGGAGTCATCCTCAACTAATTTTTCAAGATTTTTCAGCTCTTCCCTCAATGCTTCTTCTAGTATCTCCTTCATGGATATTAAAACTAAGGTGGCTCCGTTATTATTTCAAGCATTTGAGAGCGTTCCTCACTTAGAGCAAATTTCATACATAGTCATGCAAGGTCTCTCCTTTTCATATTATAGAGATCATCTTCAAATTTTGGCAATGTTCTCCAACTCATCATCTTCATCTACTCTATATTATATCCAACATGTAGATCAAGATAATGGAGAACCCTATGGTGAACCTACAAAATACAATTTTTCGTCTATTAACACAAGTTGGATTTCTGAAGCTCTTCAATTTTCTTATTCATATGCATTCAGCAATGCCTCATCATTGCGAACCAATTGGAGCATTATTGTTGATAATGGCCACAACCCTTTGTTTCTCAACTCCGCAAGAGTCACAAGAACAAGTGTGATCTCTCTAGGGTTCTCGGAAACAACAGTAACTGATTTTCTCAGGGCTCAAAACAATGATCTTCATCAAAGTTCAATGAGCATGTCTTGGGCTACAAAAGATGGAAGGGCTATTGTACAAGGGATCCGAAATACTCGTTTGGTGATTTCTAATGATACAGTTTTGCTTCAATTATTGGACCAAAATGGAAACCCTAAAGGTGTTGGAGACACTGCTATACCATGCAACAATGAAAGATTTGGATCTAGTTTGAATATTCAGAATACGGAATATTTGATTCACTGCAGCACAATTGATGTCATGGGAATAGAATCGGTATATGTTGTGGCTATTCGAAAGAATGAATTACTTAGCTTTGACCAGCATTATAAGAAAAAAGGGTTGACTGTGTTGATTGTAATGATATTGATGATATTGATTGCTCTCGTGAGCTTTCTAAGCATGAATGCAAGAAATGCAAAGAGAGAAATGAGATTGCGTGCCTCACTCTTGAAACAAATGGAAGGCACCCAACAAGCTGAGAGAAAGAACATGAATAAAAGCCTTGCATTTGCTGCTGCCAATCATGATGTTAGGGCTTCTCTTGCGGGCCTTACTGCTCTGATAGACATGTCCTTTGACTTTGTTCAAAATGCGTCTGAATTGGACACCAACTTAAAACTAATGAAGGGTTGCACCCAAGACTTACTAGGGCTGCTGAATTCTATACTTGACACAAGCAAAATTGAGGCTGGAAAAATACAGCTTGAGGAAGAGGAATTTGATGTATCAATTCTGTTGGAAGATATAGTTGACTTATACCACCCTATGGCCTCAAAGAAAGGTGTGGATCTAATCTTGGACCCTTGTGATGGTTCTATTATTAGATACTCACGTGTCAAAGGAGACAGAGGAAGACTCAAACAAGTTTTGTGTAATCTTTTGAGCAATGCTGTTAAGTTTACTGATGAGGGGCACATAGTGGTTAGGGCAAGAGCTCAAAAGCCAAGCTTGCACAATTCATTAATGGCTGGTAATAGTGAAAAACATGGATTCATGGGACGTTTATCATGCTTATGTTTGAAGAAAATTAGCAGTGATGAAATTGAAGGCACGAGTAATTCAACACACGCAGATCCATATTGCGTTATGGATTTTATATTTGAAGTGGATGATACGGGAAAAGGAATCCCCAAAGAGAAGTACGAGTCTGTGTTTGAGAACTATATCCAAGTCAAAGAAACTTCCCTTGGAGTTGGAGGAACTGGCTTGGGACTTGGGATTGTGCAATCACTGGTGCGTTTGATGCATGGAGACATTGAAATTTCAGAGAAGGACGTGGGAGAAAAGGGAACATGCTTCAAGTTCAATGTTATCCTTAATGTATACGAGACAATCACGAATGCTGCTAGCACAAAAGAAGAAGAAGGTGTTGATGAAAGAAACCACACTCAGGCACCATTACCAACCCTTCAAAGTTGTAGCTCCGGTTCAAGCATTCGTTCCCTTAGTCCAAGATTCCGAATCCGCAGCTCCAGTCCCAAGCCAGAGCCTTCTCGTGTCATTATGCTAATCGCCGACGAGTATCGGCGGAAGGCCACAGAGAAGTTCATGGAGGGCTTAGGGATCAAAGTTGCCGCCGCGAAACGGTTGGAGGATCTATTTGATGTCTTGAAGAAGATGAAACAAAAGTGTCTGTATTCAAGCAGCCACAGTAGTGGTTCTCAAGGATCAGAGTATTTGAGTGCGAGCTCTCATTCCCGTTCCAGCAGAGTTAGAGTTGCATTGAGTTCTATGGATGGAAAGACGGATATTGGAGCAGCATCTAATGGCTTTATCCTTATTGTGGTTGAGACAGATGCAGGGCCACTTTTGGAGCTGTGTAAGATAGTTTCCAACTTCAAAAGAGGGCTTTGTAACCCTTGTCAAGTTGTTTGGTTAGATAAGAAGATTCTCTTTAAGAATCTTGATAAGGACACGATTGATCCCAAGGACATGGTTCTATCGAAACCGTTTCACGGTAGCCGTTTGTTCCAGGTTATAAAGCTTCTTCCTGAGTTCGGTGGATCCAAATTGAACACTCAGGAATCCTTTGTGGATCAATCTTCTGTAATACAAGAATGTGAGGATACAGAAAAGCCGTTGAGTGGTAAGAAAATTTTGGTGGTTGATGATACTCCATTGATGCGCATGATTGCTTTGCGTACTTTGATCAAGCTTGGAGCGATTATAGAGCAGTGTGAGAATGGAGAAGCAGCTGTGCATCTAGTTGGTGATGGTTTAATCAAGGATTTTCCTAATCCCCCTTACGATTACATCTTAATGGATTGCCAGATGCCAGTAATGAACGGGTTCGAGGCAACAAGGAAAATAAGAAAGATAGAGAAGAGGTATGGTAATATTCGCATTCCTATAATTGCATTAACAGCTGACAGTGACAAAATGACCATAGATGCTGGAATGGACTTTCACTTGGTAAAGCCTATCGACAGAAACAAATTTCTTGAAGCCATTCGAGACATCAATGCTAAAAAGCGCTCCATTTAA 2991 0.4032 MESSSTNFSRFFSSSLNASSSISFMDIKTKVAPLLFQAFESVPHLEQISYIVMQGLSFSYYRDHLQILAMFSNSSSSSTLYYIQHVDQDNGEPYGEPTKYNFSSINTSWISEALQFSYSYAFSNASSLRTNWSIIVDNGHNPLFLNSARVTRTSVISLGFSETTVTDFLRAQNNDLHQSSMSMSWATKDGRAIVQGIRNTRLVISNDTVLLQLLDQNGNPKGVGDTAIPCNNERFGSSLNIQNTEYLIHCSTIDVMGIESVYVVAIRKNELLSFDQHYKKKGLTVLIVMILMILIALVSFLSMNARNAKREMRLRASLLKQMEGTQQAERKNMNKSLAFAAANHDVRASLAGLTALIDMSFDFVQNASELDTNLKLMKGCTQDLLGLLNSILDTSKIEAGKIQLEEEEFDVSILLEDIVDLYHPMASKKGVDLILDPCDGSIIRYSRVKGDRGRLKQVLCNLLSNAVKFTDEGHIVVRARAQKPSLHNSLMAGNSEKHGFMGRLSCLCLKKISSDEIEGTSNSTHADPYCVMDFIFEVDDTGKGIPKEKYESVFENYIQVKETSLGVGGTGLGLGIVQSLVRLMHGDIEISEKDVGEKGTCFKFNVILNVYETITNAASTKEEEGVDERNHTQAPLPTLQSCSSGSSIRSLSPRFRIRSSSPKPEPSRVIMLIADEYRRKATEKFMEGLGIKVAAAKRLEDLFDVLKKMKQKCLYSSSHSSGSQGSEYLSASSHSRSSRVRVALSSMDGKTDIGAASNGFILIVVETDAGPLLELCKIVSNFKRGLCNPCQVVWLDKKILFKNLDKDTIDPKDMVLSKPFHGSRLFQVIKLLPEFGGSKLNTQESFVDQSSVIQECEDTEKPLSGKKILVVDDTPLMRMIALRTLIKLGAIIEQCENGEAAVHLVGDGLIKDFPNPPYDYILMDCQMPVMNGFEATRKIRKIEKRYGNIRIPIIALTADSDKMTIDAGMDFHLVKPIDRNKFLEAIRDINAKKRSI 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01263 996 Pfam Response regulator receiver domain 868 987 IPR001789 GO:0000160
Arst9g01263 996 CDD REC_hyHK_CKI1_RcsC-like 868 986 - -
Arst9g01263 996 Gene3D - 402 614 IPR036890 -
Arst9g01263 996 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 325 401 IPR036097 GO:0000155|GO:0007165
Arst9g01263 996 MobiDBLite consensus disorder prediction 633 648 - -
Arst9g01263 996 SMART REC_2 866 986 IPR001789 GO:0000160
Arst9g01263 996 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 389 605 IPR036890 -
Arst9g01263 996 PANTHER TWO-COMPONENT HISTIDINE KINASE 40 987 - -
Arst9g01263 996 Gene3D - 318 401 - -
Arst9g01263 996 PRINTS Bacterial sensor protein C-terminal signature 534 548 IPR004358 GO:0016310|GO:0016772
Arst9g01263 996 PRINTS Bacterial sensor protein C-terminal signature 568 586 IPR004358 GO:0016310|GO:0016772
Arst9g01263 996 PRINTS Bacterial sensor protein C-terminal signature 552 562 IPR004358 GO:0016310|GO:0016772
Arst9g01263 996 ProSiteProfiles Histidine kinase domain profile. 341 610 IPR005467 -
Arst9g01263 996 SUPERFAMILY CheY-like 862 989 IPR011006 -
Arst9g01263 996 ProSiteProfiles Response regulatory domain profile. 867 990 IPR001789 GO:0000160
Arst9g01263 996 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 450 606 IPR003594 -
Arst9g01263 996 Gene3D - 846 995 - -
Arst9g01263 996 SMART HKATPase_4 450 610 IPR003594 -
Arst9g01263 996 MobiDBLite consensus disorder prediction 620 648 - -
Arst9g01263 996 SMART HisKA_10 334 400 IPR003661 GO:0000155|GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01263 Arst-Chr9 16116656 16122040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01263 24 993 Histidine Kinase Gene Family AT2G47430 38.360 0.0 639
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Arst9g01263 HATPase_c 2.9e-24 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01263 - - adu:107464915 1855.49