Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01228 ATGTACGGAATGATGACCACGCATGCTTTGGGAACCAATGTGAATGTCCACGATCACGTTGAAACGACCGCCAAGTCGACGTTTCACGGCGTTCCTGATGCGGTGGGAGCGTCATTGCTTCCCCGGAGCTCGAGCTTTAAGAACATTTTTTTGGCGGAGAACTGGGCGGAGCTGCCACTCAAGGAGGACGACACGGACGACATGGTCATCTACGGTGCATTGCAGGAGGCTGCCACCACCGGGTGGTGCCCCGCCAGAGAGAATGGCGGCGTTGGTAGCGCGTCGGAGAAATTGGAAAATGAGGGCAAGGGCAATGGCATTGTGGAAGCGCGTGAGGTTGACGCGCTGGCTAAGGGCGGTAGAGGGTATAGAGGGGTTCGGAGGCGGCCGTGGGGAAAGTACGCGGCTGAGATAAGAGATCCGAAGAGGAACGGTGTGAGAGTGTGGCTTGGGACTTATGAGACGGCTGAGGATGCGGCTTTGGCTTATGATCGAGCCGCGTTCAAGATGCGTGGCTCAAAAGCCAAGCTGAATTTTCCTCACTTGATTGGGTCGGACGAAGTTGGTGAGCCGGTGAGAGTTACACTAAAACGGCGCTCACCCGAGACACCCTTGCCGTGCCCTTCTTACTCTTTCGATTACTGTAACAATGCAGAGAAGCGGAGCAAAATTGTTGGTCAGGGTGCAGTAGTGGCGGCCACGGCTTTAGAGCCCGCTAATAAAAGTATGTGGCAATTTTCCAGTCGGTGA 750 0.552 MYGMMTTHALGTNVNVHDHVETTAKSTFHGVPDAVGASLLPRSSSFKNIFLAENWAELPLKEDDTDDMVIYGALQEAATTGWCPARENGGVGSASEKLENEGKGNGIVEAREVDALAKGGRGYRGVRRRPWGKYAAEIRDPKRNGVRVWLGTYETAEDAALAYDRAAFKMRGSKAKLNFPHLIGSDEVGEPVRVTLKRRSPETPLPCPSYSFDYCNNAEKRSKIVGQGAVVAATALEPANKSMWQFSSR 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01228 249 PRINTS Ethylene responsive element binding protein signature 162 182 IPR001471 GO:0003700|GO:0006355
Arst9g01228 249 PRINTS Ethylene responsive element binding protein signature 123 134 IPR001471 GO:0003700|GO:0006355
Arst9g01228 249 ProSiteProfiles AP2/ERF domain profile. 122 180 IPR001471 GO:0003700|GO:0006355
Arst9g01228 249 SMART rav1_2 122 186 IPR001471 GO:0003700|GO:0006355
Arst9g01228 249 SUPERFAMILY DNA-binding domain 122 181 IPR016177 GO:0003677
Arst9g01228 249 CDD AP2 130 182 IPR001471 GO:0003700|GO:0006355
Arst9g01228 249 Gene3D AP2/ERF domain 122 181 IPR036955 GO:0003700|GO:0006355
Arst9g01228 249 PANTHER DNA-BINDING DOMAIN 94 199 IPR044808 GO:0003700|GO:0009873
Arst9g01228 249 FunFam Ethylene-responsive transcription factor 2 121 181 - -
Arst9g01228 249 Pfam AP2 domain 122 172 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01228 Arst-Chr9 15323318 15324222 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01228 26 228 AP2-EREBP Transcription Factor Family AT2G44840 51.724 7.99e-60 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Arst9g01228 AP2 1.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01228 K09286 - gmx:100793366 236.113