Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01217 ATGGCTGGTGAAGGAGACAAAAAGAACGACTTCTATGCGGTTCTGGGATTGAAGAAAGAGTGCACTGATTCAGAGCTAAGGAATGCATATAAGAAACTAGCACTGAAATGGCACCCTGATCGTTGTTCAGCGTCGGGGAATTCAAAGTTCGTTGAAGAAGCTAAGAAGAAATTCCAAGCAATCCAGCAAGCCTATTCTGTTTTATCTGACGCCAACAAAAGGCTAATGTACGACGTAGGAGTCTACGACAGTGATGACGACGAAAACGGCATGGGGGACTTCTTGAACGAAATGGTAACAATGATGAGTCAAACAAAGTCAAATGAAAATGGAGAGGAGAGCTTTGAGGAGCTGCAACAGCTGTTTGAAGATATGTTTCAAGATGATATTGGATCAGATAGAAGCACCACTTTTACTACTGCCGGTTGCTCCTCTTCCTCGGCGTGCATGGCTTATAGTGGAAACTCCAACTCGAATAAGCGAAATTCGGCTGAGATGAATTTTTTGAAGGCAGATAATTCCTTTGACTTTGATACCAGTTACCAGAACTTCTGCTTAGGGACAGGGGAAGCACCTCCGAGATATAAAGAGGGAAAAGCTAAAAATAATTCGCGACGGAGGAGGTAG 627 0.4354 MAGEGDKKNDFYAVLGLKKECTDSELRNAYKKLALKWHPDRCSASGNSKFVEEAKKKFQAIQQAYSVLSDANKRLMYDVGVYDSDDDENGMGDFLNEMVTMMSQTKSNENGEESFEELQQLFEDMFQDDIGSDRSTTFTTAGCSSSSACMAYSGNSNSNKRNSAEMNFLKADNSFDFDTSYQNFCLGTGEAPPRYKEGKAKNNSRRRR 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01217 208 MobiDBLite consensus disorder prediction 188 208 - -
Arst9g01217 208 CDD DnaJ 10 70 IPR001623 -
Arst9g01217 208 PRINTS DnaJ domain signature 53 73 IPR001623 -
Arst9g01217 208 PRINTS DnaJ domain signature 12 30 IPR001623 -
Arst9g01217 208 PRINTS DnaJ domain signature 73 92 IPR001623 -
Arst9g01217 208 PRINTS DnaJ domain signature 30 45 IPR001623 -
Arst9g01217 208 Gene3D DnaJ domain 6 138 IPR036869 -
Arst9g01217 208 ProSiteProfiles dnaJ domain profile. 10 81 IPR001623 -
Arst9g01217 208 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Arst9g01217 208 SUPERFAMILY Chaperone J-domain 8 80 IPR036869 -
Arst9g01217 208 SMART dnaj_3 9 73 IPR001623 -
Arst9g01217 208 Pfam DnaJ domain 10 78 IPR001623 -
Arst9g01217 208 PANTHER PUTATIVE, EXPRESSED-RELATED 4 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01217 Arst-Chr9 14888493 14893936 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01217 11 78 C2H2 Transcription Factor Family AT1G74250 44.928 2.95e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01217 - - lja:Lj3g3v2576120.1 330.487