Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01216 ATGGCTGGTGAAGGAGACAAAAAGAACGACTTCTATGCGGTTCTGGGATTGAAGAAAGAGTGCACTGATTCAGAGCTAAGGAATGCATATAAGAAACTAGCACTGAAATGGCACCCTGATCGTTGTTCAGCGTCGGGGAATTCAAAGTTCGTTGAAGAAGCTAAGAAGAAATTCCAAGCAATCCAGCAAGCCTATTCTGTTTTATCTGACGCCAACAAAAGGCTAATGTACGACGTAGGAGTCTACGACAGTGATGACGACGAAAACGGCATGGGGGACTTCTTGAACGAAATGGTAACAATGATGAGTCAAACAAAGTCAAATGAAAATGGAGAGGAGAGCTTTGAGGAGCTGCAACAGCTGTTTGAAGATATGTTTCAAGATGATATTGGATCAGATAGAAGCACCACTTTTACTACTGCCGGTTGCTCCTCTTCCTCGGCGTGCATGGCTTATAGTGGAAACTCCAACTCGAATAAGCGAAATTCGGCTGAGATGAATTTTTTGAAGGCAGATAATTCCTTTGACTTTGATACCAGTTACCAGAACTTCTGCTTAGGGGCTGGTCTTGTTAATTATCATTACTACCAATGA 594 0.4259 MAGEGDKKNDFYAVLGLKKECTDSELRNAYKKLALKWHPDRCSASGNSKFVEEAKKKFQAIQQAYSVLSDANKRLMYDVGVYDSDDDENGMGDFLNEMVTMMSQTKSNENGEESFEELQQLFEDMFQDDIGSDRSTTFTTAGCSSSSACMAYSGNSNSNKRNSAEMNFLKADNSFDFDTSYQNFCLGAGLVNYHYYQ 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01216 197 CDD DnaJ 10 70 IPR001623 -
Arst9g01216 197 PRINTS DnaJ domain signature 30 45 IPR001623 -
Arst9g01216 197 PRINTS DnaJ domain signature 12 30 IPR001623 -
Arst9g01216 197 PRINTS DnaJ domain signature 53 73 IPR001623 -
Arst9g01216 197 PRINTS DnaJ domain signature 73 92 IPR001623 -
Arst9g01216 197 ProSiteProfiles dnaJ domain profile. 10 81 IPR001623 -
Arst9g01216 197 Gene3D DnaJ domain 6 138 IPR036869 -
Arst9g01216 197 Pfam DnaJ domain 10 78 IPR001623 -
Arst9g01216 197 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Arst9g01216 197 PANTHER PUTATIVE, EXPRESSED-RELATED 4 173 - -
Arst9g01216 197 SMART dnaj_3 9 73 IPR001623 -
Arst9g01216 197 SUPERFAMILY Chaperone J-domain 8 80 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01216 Arst-Chr9 14888493 14893941 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01216 12 78 C2H2 Transcription Factor Family AT1G74250 45.588 2.82e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01216 - - lang:109338829 315.464