Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01188 ATGTCAAATTTCCCTGATGCGGTGGCCGATGGCCGGAGGTCCGGCAAGGCACCGGAGAAGTCCAATTTTTCTCAGACTTGCAGCCTCTTGAGCCAGTTCTTGAAGGAGAAGCGTACTTCTGGAGCTTCCACTCTCGGAGTTGGTTCTAAAATGGAGCCTAGAGGTACCAAGGATTTTCTAGCCAGTATTCATAATTCAGATGGAGCTTTGAGACTAAATTCTGCGGCTATGGATTCCCTTCCCCAGCTTGTGGAAAATCCCTGCATCAAGAAGTCTAATATTAGGTCATTGGAACCTGAAACTCCACAATTGACTATATTCTATTCCGGAAAAATGTTGGTATTTGATGCCTTTCCACCAGACAAGGCCACAGAGGTAATGGAGTTAGCCACCAAGTTAGCCTCGAACAGTTCCATTGTCGAACAAAGCCAGCCCAGTGCTTCGGTTGCGACTGAAAATTTGAGTAAAGACAAAGTGCCGCAGACAAATAATGCCTCTGAAACTCCTAGGCCAGGAAAGCAAGCTGTTGGTTCCGATATGAGGTATCCAAGGAGAGCTTCACTTGTAAAATTTCTTGAGAAGAGAAAAGAAAGGGTCATTGCTAGAGGACCTTACCAAGTAAACAACCCAAATCCCAAGCCTGAGGGTAGCAGTTCCGGCGGCGAACCTTACCCGGTAAACAGCCCGAATTCGAAGCACGAGGAAGGCAGTTCAGGGGTTGTACCTGAAGATCAGTCCTCCAAACACTTTGACCTTAACTCATAG 765 0.4693 MSNFPDAVADGRRSGKAPEKSNFSQTCSLLSQFLKEKRTSGASTLGVGSKMEPRGTKDFLASIHNSDGALRLNSAAMDSLPQLVENPCIKKSNIRSLEPETPQLTIFYSGKMLVFDAFPPDKATEVMELATKLASNSSIVEQSQPSASVATENLSKDKVPQTNNASETPRPGKQAVGSDMRYPRRASLVKFLEKRKERVIARGPYQVNNPNPKPEGSSSGGEPYPVNSPNSKHEEGSSGVVPEDQSSKHFDLNS 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01188 254 SMART tify_2 97 132 IPR010399 -
Arst9g01188 254 ProSiteProfiles Tify domain profile. 97 132 IPR010399 -
Arst9g01188 254 MobiDBLite consensus disorder prediction 199 254 - -
Arst9g01188 254 Pfam tify domain 98 130 IPR010399 -
Arst9g01188 254 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 13 214 IPR040390 -
Arst9g01188 254 MobiDBLite consensus disorder prediction 1 23 - -
Arst9g01188 254 MobiDBLite consensus disorder prediction 135 171 - -
Arst9g01188 254 Pfam Jas motif 184 206 IPR018467 -
Arst9g01188 254 MobiDBLite consensus disorder prediction 135 182 - -
Arst9g01188 254 MobiDBLite consensus disorder prediction 210 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01188 Arst-Chr9 13817134 13819742 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01188 8 220 Tify Gene Family AT1G19180 32.645 1.51e-24 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Arst9g01188 tify 1.2e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01188 K13464 - gmx:100778559 330.487