Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Arst9g01180 | ATGGGTTCTCTGGGAGATCCAAGAAGTTGGATTTCATATATGAACAGCAAAGATTGTTCATTAGAGTGGTGTCACAAACATAAATTGTATCCTCCACCGTCAACAGCACCACCTAATTCAAGGCCAAAATTTTCCCCTCTTATAATTGCCATGGCGGGGATCTTGGCCACCGCTTTTATTCTTGCAAGTTACTACTATAGCCGCCGCAGAGAGAACTCCAACGATGACGATGACGATTCAGTCCATGAAGCCGAAACTTGGTGGCATCAATACTACGTCTCAACAAGCACCACAACCAGAATTGGCGGCGACTTAGATGAGGATGCGTTAAAGTGGATGGCAGTGTGGAAGTACAAGAGTGGTAAAAGCAGAGCCGATAGCTGTTGTGTTTGTTTGAATGAATTTGAAGAGGGAGACAGTGTTAGGGCTTTGCCGAACTGCACCCATGCTTTTCATCCTCTTTGCATTCAGACATGGCTCAAATCTCACTCCACCTGCCCTCTTTGTCGTCGTGCCACTGCCCCCTAG | 528 | 0.4659 | MGSLGDPRSWISYMNSKDCSLEWCHKHKLYPPPSTAPPNSRPKFSPLIIAMAGILATAFILASYYYSRRRENSNDDDDDSVHEAETWWHQYYVSTSTTTRIGGDLDEDALKWMAVWKYKSGKSRADSCCVCLNEFEEGDSVRALPNCTHAFHPLCIQTWLKSHSTCPLCRRATAP | 175 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Arst9g01180 | 175 | ProSiteProfiles | Zinc finger RING-type profile. | 128 | 170 | IPR001841 | - | |
Arst9g01180 | 175 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 92 | 174 | IPR013083 | - | |
Arst9g01180 | 175 | Pfam | Ring finger domain | 126 | 170 | IPR001841 | - | |
Arst9g01180 | 175 | SUPERFAMILY | RING/U-box | 127 | 172 | - | - | |
Arst9g01180 | 175 | CDD | RING-H2_EL5-like | 127 | 170 | - | - | |
Arst9g01180 | 175 | PANTHER | RING-H2 FINGER PROTEIN ATL16 | 30 | 172 | IPR044600 | GO:0016567|GO:0016740 | |
Arst9g01180 | 175 | SMART | ring_2 | 128 | 169 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Arst9g01180 | Arst-Chr9 | 13623231 | 13624212 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Arst9g01180 | 1 | 170 | C3H Transcription Factor Family | AT3G03550 | 38.916 | 3.30e-32 | 116 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Arst9g01180 | - | - | adu:107464811 | 369.777 |