Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01146 ATGGACTCGCGAGCTCAGTATAATCCGCGCACCGTGGAAGAGGTTTTTAGGGATTTCAAGGGTCGCCGAGCAGATGTTGAAGAATTCTACAACCAATGTGACCCTGAGAAGGAGAACTTGTGCTTGTATGGCTTTCCTAGCGAGCAGTGGGAAGTAAATTTACCCGCTGAAGAAGTTCCACCAGAGCTTCCTGAGCCTGTGCTGGGCATTAACTTTGCTAGGGATGGCATGCAAGAAAAAGACTGGTTATCTTTGGTCGCTGTTCACAGCGATGCGTGGTTACTTGCTATTGCCTTCTATTTTGGAGCCAGATTTGGGTTTGATAAAGCTGATAGGAAACGCCTTTTCAATATGATTAATGAAGTGCCCACAATATTTGAAGTTGTTACTGGTGCAGCCAAGAAACAAGTGAAGGAGAAGTCTTCAGTTTCGAACCATAGTGGCAGCAAATCAAAGTCCAACTCTAAAGCACAGCGTGCTCCGGAACCACAAGGTAGGCAGCAAAAGGCATTGCAAGCAAAAGATGAGGACGATGAACTGGACGAGCAAGAAGATGATGAACACGGGGAAACCTTGTGTGGGGCATGTGGCGAGCATTATGGCACCGATGAATTCTGGATTTGCTGTGACATTTGCGAGAAGTGGTTCCATGGGAAATGCGTGAAGATCACCCCTGCTAGGGCAGAGCATATCAAGCAGTACAAGTGCCCATCATGCAGTAATAAGCGAACTCGCCCCTGA 741 0.4737 MDSRAQYNPRTVEEVFRDFKGRRADVEEFYNQCDPEKENLCLYGFPSEQWEVNLPAEEVPPELPEPVLGINFARDGMQEKDWLSLVAVHSDAWLLAIAFYFGARFGFDKADRKRLFNMINEVPTIFEVVTGAAKKQVKEKSSVSNHSGSKSKSNSKAQRAPEPQGRQQKALQAKDEDDELDEQEDDEHGETLCGACGEHYGTDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRTRP 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01146 246 ProSitePatterns Zinc finger PHD-type signature. 193 239 IPR019786 -
Arst9g01146 246 Coils Coil 166 186 - -
Arst9g01146 246 PANTHER CPG BINDING PROTEIN 8 245 IPR045104 GO:0006355|GO:0042393
Arst9g01146 246 ProSiteProfiles Zinc finger PHD-type profile. 190 242 IPR019787 -
Arst9g01146 246 SMART PHD_3 192 240 IPR001965 -
Arst9g01146 246 MobiDBLite consensus disorder prediction 142 162 - -
Arst9g01146 246 SUPERFAMILY FYVE/PHD zinc finger 182 243 IPR011011 -
Arst9g01146 246 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 182 241 IPR013083 -
Arst9g01146 246 CDD PHD_AL_plant 192 242 IPR044104 -
Arst9g01146 246 FunFam PHD finger alfin-like protein 185 241 - -
Arst9g01146 246 Pfam Alfin 11 131 IPR021998 GO:0006355|GO:0042393
Arst9g01146 246 MobiDBLite consensus disorder prediction 137 184 - -
Arst9g01146 246 Pfam PHD-finger 193 242 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01146 Arst-Chr9 12965797 12970459 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01146 5 245 Alfin-like Transcription Factor Family AT3G42790 73.092 2.93e-119 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Alfin-like Arst9g01146 Alfin 1.8e-59 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01146 K26274 - gmx:100170700 455.677