LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst9g01118	ATGGCATCTTCCAAAGCTTTCCAAATAAAACTTGTTGTATTTGTTGGTCTCTTGCTTGTCTCAAAATTTAAGGGCATGGAAGAAAATATGATGTCTGAAAATTCTTATTCATATACTGATAAAACTTTAACTTTCCCAGCTCCTCAAATAAAATATGATGTCTTTGTTAGCTTTAGGGGCACAGATATTCGCCAAGGTTTGCTGAGTCATTTGATTAAGGCATTTCATCTAAAACAAGTTTTTGCCTTTGTTGATGACAAGCTTGAGAGGGGAGATGACATATCAGATGCACTTTTTGGAGCAATAGAAAAATCGCTGATTTCATTGATCATATTCTCACAAGACTATGTTTCTTCGAGATGGTGTTTAGAAGAACTTGTGAAAATAGTGGAGTGTAGAGAAAAAGATGGACAAACCGTAATACCTGTTTTTTACAAAGTAGATCCATCAGATGTACGATATCAAAAGGGCACCTTTGCAAATGTGTTTGCTGAACACGAGGAAAGGTATGATATGATCAAGGTGCAAAACTGGAGAACCGCTTTGAAAAATTCTGCTGATTTATCAGGATTTCACTCAACAAATTTTAGGAATGATGCTCAGCTTGTTGATCAGATTGTTGATTTTATATCATCAAGATTAAATGACATGCATCAGGTTAAATCAAAAGGACTTGTTGGAATTCACAAACCAATTGCACAGTTAGAGTCGTTGATGCTCAAAGAATCCGAAGGCGTACGTGTTATTGGAATTTGGGGTTTGGGCGGTATTGGTAAGACAACCATTGCAGAAGAAGTATACAACAGAATGTGTGCCGAATTTGAATCTTGTTGTTTCTTGGCAAATGTAAGAAAAGAGTCAGAAAGAGATGGAATAATGTCTTTGAAGAAGAAACTCTTTTCTACACTATTGAATGAACAAAATTTGAGAATTGACTTACCAAAGGGATTGCCTGATTATGTTGAGAAAAGGCTTGGGCGCATGAAGGTTCTCATTGTTCTAGATGATGTGAATGATTCTGACCAGTTAGAAACTTTAATTGGAGCTCGTGATTGGTTTGGATTAGGCAGTAGAATCATTATAACAACTAGAGATAAGCAAGTGCTAGTTGGAGAAGCTGAAGAGATATACCAAGTTGAGGCATTGGATTGTGATGAATCTCTTGAACTCTTCATTCTAAATGCCTTCAAACAAAACCAGTTTGAAATGGAGTATTGTGAGCTGTCAAGGAGGGTGGTCAAGTATGCCAAAGGCATTCCGTTAGTTGTTAAAGTTTTGGCTCAACTTCTTCGTGGCAAACGAAAGGATATATGGGAAAGTCAATTGGAGAAACTTAAAAGAATGCCTAATAAGAAAGTTCTTGATATAATGCGGCTGAGCTATGACGATCTTGATCGTCAAGAGCAACAGATTTTCTTAGACATTGCCTGTTTTTTCAATGGATTGAAGCTCAAGTTGGAATACATAAACGTTTTACTGAAAGACCAAGATTATGCAGTGGCTGCTGGGATGGAAAGGCTGAAAGATAAGGCTCTTATAATTATTTCTGAGCACAATATTGTATCTATGCATGATATTATTCAAGAAATGGCTTGGGAGATCATTAAAGATGGCTCTGCTGAATACCCTGGAAACCAACTTCGGTTATGGGATTCTCACGACATATATCAAGTATTGAAAAACAACAGGGGGAGTGAGGCCATTAGAAGCATATCCTTCAACTTTTCAGCAATTAAGGACCTTCAGTTAAGCCAAGAAGTCTTTGCTAAGATGAGCAAACTACGATTTCTAAATTTCTATAGCAACATATCTCAAGAGGCCATGTATAGTTCTGATGGACTTCCATCTTCGTGGAACAAAGGCCTGTGTCTTCCTCAAGGACTTGATTCTTTGTCAAATGAAGTAAGATACCTTAGCTGGATGCATTACCCTCTGGATTCCTTGCCAACCAACTTTTCTGCAGAAAATCTTGTAATATTGGACTTGTCCTTCAACCGAATGGAAAAACTTTGGTGTGGGGTGAAGAATCTGGCAAATTTAAGGATCCTTAGATTATATAATTCCTTACACCTGACCATGCTGCCAGACTTGTCGAAAGCCAGAAACCTTGAAATACTAGTTATTCGCAAGAGTTTCAGTTTCCTTTATGTACATCCATCTGTTTTTTGTCTCAACAAGCTTGAGATATTGGATCTAGGAGGGTGCGTTTCCCTTAGGCAGCTCCGAAGCTATATCCATTTGAGCTCTCTCCGTTCTCTCTCTCTCGTCGGCTGCGTAAGGCTACAGGACTTCTCAGTTACCTCAGAGAATCTGGAAGGGTTGAACTTAGAGCTCACAGGTATCCAACAACTACCGACATCCTTTGGGCGTCAAAGCAAACTCGAAACATTACATCTAGGATTGTCTGATATTCAGAGCATTCCTGAAACCATCAAGAATCTCACAAGGTTCAAGTATCTTAGCATCAGATATTGTTGGAACCTCAGGGATTTACCAGAGCTTCCCCCATCTCTTGAGTATCTAGACGCCACCGGATGCACATCACTCAAGACAGTGTTGTTTCCATCATCGGCTGCCTTGCAGCTTAAGGAAAACAGGAAAAGCATTTTGTTCTGGAATTGCTTGAAATTGGATCAACACTCCCTTGGGGCTATTGAATTGAATGCACGAATCAACCTCATGAAATTTGCATACCAGCATTTATCATCATTAACACATGACTACTATAAAGATAATGACAATGAAGCCATCTATGTGTATCCAGGAAGCAATGTTCCAAAGTGGTTGGAGTATAGAACATCACATGATTATGTAAATGTTGATATCTCTTCTTCGGCTGCGCCACATTCCCCTTCGTTGGGCTTCATATTTTGCTTCATTGTTCCACGAATCCTCTCGGATGGTTTTGCTTTCAGGTTTACCATAAGTATTGCTGAAGTTGAAGGAAACAATGTCAAATTTTACTTGGAGAAACCACTTGAAAAAATTGTTTCTGATCATGTGTTTCTCGTGTATGATCACCGGCTTACTCACTTCCTTAATAGCAGAAGCAATGTTGAAGTTCAACAGAGGCTTAAAATTAAGGTTGCGGCGGTGACACAGACAGGGAAATCAGATTATGTGCCTGTGAAGCTAAAAGGGTTTGGGATCAGTCCAATAAAAGCATCAGAATATCAAAATTTCATTCAGAAAATGGAATTGGTTGATAAGAGGACGAAACGAGCTGGTTCACTTACTTTGGTTGGAAATACTTCACTTGAAAGATTTTGCTTCCAAGACCAGAAAACTTACTTTGACTTCATTCAAGAAATCAACTACGTTGATGGTTGTTGGAAATTCAAACACCATCAATTCACTAATTATTCATATAGGTATTTTATTTGA	3384	0.3842	MASSKAFQIKLVVFVGLLLVSKFKGMEENMMSENSYSYTDKTLTFPAPQIKYDVFVSFRGTDIRQGLLSHLIKAFHLKQVFAFVDDKLERGDDISDALFGAIEKSLISLIIFSQDYVSSRWCLEELVKIVECREKDGQTVIPVFYKVDPSDVRYQKGTFANVFAEHEERYDMIKVQNWRTALKNSADLSGFHSTNFRNDAQLVDQIVDFISSRLNDMHQVKSKGLVGIHKPIAQLESLMLKESEGVRVIGIWGLGGIGKTTIAEEVYNRMCAEFESCCFLANVRKESERDGIMSLKKKLFSTLLNEQNLRIDLPKGLPDYVEKRLGRMKVLIVLDDVNDSDQLETLIGARDWFGLGSRIIITTRDKQVLVGEAEEIYQVEALDCDESLELFILNAFKQNQFEMEYCELSRRVVKYAKGIPLVVKVLAQLLRGKRKDIWESQLEKLKRMPNKKVLDIMRLSYDDLDRQEQQIFLDIACFFNGLKLKLEYINVLLKDQDYAVAAGMERLKDKALIIISEHNIVSMHDIIQEMAWEIIKDGSAEYPGNQLRLWDSHDIYQVLKNNRGSEAIRSISFNFSAIKDLQLSQEVFAKMSKLRFLNFYSNISQEAMYSSDGLPSSWNKGLCLPQGLDSLSNEVRYLSWMHYPLDSLPTNFSAENLVILDLSFNRMEKLWCGVKNLANLRILRLYNSLHLTMLPDLSKARNLEILVIRKSFSFLYVHPSVFCLNKLEILDLGGCVSLRQLRSYIHLSSLRSLSLVGCVRLQDFSVTSENLEGLNLELTGIQQLPTSFGRQSKLETLHLGLSDIQSIPETIKNLTRFKYLSIRYCWNLRDLPELPPSLEYLDATGCTSLKTVLFPSSAALQLKENRKSILFWNCLKLDQHSLGAIELNARINLMKFAYQHLSSLTHDYYKDNDNEAIYVYPGSNVPKWLEYRTSHDYVNVDISSSAAPHSPSLGFIFCFIVPRILSDGFAFRFTISIAEVEGNNVKFYLEKPLEKIVSDHVFLVYDHRLTHFLNSRSNVEVQQRLKIKVAAVTQTGKSDYVPVKLKGFGISPIKASEYQNFIQKMELVDKRTKRAGSLTLVGNTSLERFCFQDQKTYFDFIQEINYVDGCWKFKHHQFTNYSYRYFI	1127

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst9g01118	1127	Gene3D	Ribonuclease Inhibitor	535	743	IPR032675	-
	Arst9g01118	1127	FunFam	Disease resistance protein (TIR-NBS-LRR class)	48	216	-	-
	Arst9g01118	1127	SUPERFAMILY	L domain-like	574	923	-	-
	Arst9g01118	1127	SUPERFAMILY	"Winged helix" DNA-binding domain	451	560	IPR036390	-
	Arst9g01118	1127	Pfam	NB-ARC domain	237	460	IPR002182	GO:0043531
	Arst9g01118	1127	Gene3D	-	381	465	IPR042197	-
	Arst9g01118	1127	Pfam	TIR domain	51	225	IPR000157	GO:0007165
	Arst9g01118	1127	SMART	till_3	51	188	IPR000157	GO:0007165
	Arst9g01118	1127	PRINTS	Disease resistance protein signature	722	738	-	-
	Arst9g01118	1127	PRINTS	Disease resistance protein signature	248	263	-	-
	Arst9g01118	1127	PRINTS	Disease resistance protein signature	324	338	-	-
	Arst9g01118	1127	PRINTS	Disease resistance protein signature	416	430	-	-
	Arst9g01118	1127	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	213	475	IPR027417	-
	Arst9g01118	1127	Gene3D	-	49	217	IPR035897	-
	Arst9g01118	1127	Gene3D	Ribonuclease Inhibitor	746	882	IPR032675	-
	Arst9g01118	1127	SUPERFAMILY	Toll/Interleukin receptor TIR domain	48	191	IPR035897	-
	Arst9g01118	1127	ProSiteProfiles	TIR domain profile.	50	214	IPR000157	GO:0007165
	Arst9g01118	1127	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	52	848	IPR044974	GO:0006952
	Arst9g01118	1127	Gene3D	-	218	379	IPR027417	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst9g01118	Arst-Chr9	12564177	12568534	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst9g01118	52	843	WRKY Transcription Factor Family	AT4G12020	31.106	1.88e-101	351

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst9g01118	-		-	ahf:112776244	1722.6