LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst9g01117	ATGTACATATTTATGCTTCCTAATTGTGATATTGAATGGTGTAGAAGCAAACTGAGGCAGACAGGGTGCACTTCTTTATCTCCAATGGCATCTTCCAAAGCTTTCCAAATAAAACTTGTTGTATTTGTTGGTCTCTTGCTTGTCTCAAAATTTAAGGGCATGGAAGAAAATATGATGTCTGAAAATTCTTATTCATATACTGATAAAACTTTAACTTTCCCAGCTCCTCAAATAAAATATGATGTCTTTGTTAGCTTTAGGGGCACAGATATTCGCCAAGGTTTGCTGAGTCATTTGATTAAGGCATTTCATCTAAAACAAGTTTTTGCCTTTGTTGATGACAAGCTTGAGAGGGGAGATGACATATCAGATGCACTTTTTGGAGCAATAGAAAAATCGCTGATTTCATTGATCATATTCTCACAAGACTATGTTTCTTCGAGATGGTGTTTAGAAGAACTTGTGAAAATAGTGGAGTGTAGAGAAAAAGATGGACAAACCGTAATACCTGTTTTTTACAAAGTAGATCCATCAGATGTACGATATCAAAAGGGCACCTTTGCAAATGTGTTTGCTGAACACGAGGAAAGGTATGATATGATCAAGGTGCAAAACTGGAGAACCGCTTTGAAAAATTCTGCTGATTTATCAGGATTTCACTCAACAAATTTTAGGAATGATGCTCAGCTTGTTGATCAGATTGTTGATTTTATATCATCAAGATTAAATGACATGCATCAGGTTAAATCAAAAGGACTTGTTGGAATTCACAAACCAATTGCACAGTTAGAGTCGTTGATGCTCAAAGAATCCGAAGGCGTACGTGTTATTGGAATTTGGGGTTTGGGCGGTATTGGTAAGACAACCATTGCAGAAGAAGTATACAACAGAATGTGTGCCGAATTTGAATCTTGTTGTTTCTTGGCAAATGTAAGAAAAGAGTCAGAAAGAGATGGAATAATGTCTTTGAAGAAGAAACTCTTTTCTACACTATTGAATGAACAAAATTTGAGAATTGACTTACCAAAGGGATTGCCTGATTATGTTGAGAAAAGGCTTGGGCGCATGAAGGTTCTCATTGTTCTAGATGATGTGAATGATTCTGACCAGTTAGAAACTTTAATTGGAGCTCGTGATTGGTTTGGATTAGGCAGTAGAATCATTATAACAACTAGAGATAAGCAAGTGCTAGTTGGAGAAGCTGAAGAGATATACCAAGTTGAGGCATTGGATTGTGATGAATCTCTTGAACTCTTCATTCTAAATGCCTTCAAACAAAACCAGTTTGAAATGGAGTATTGTGAGCTGTCAAGGAGGGTGGTCAAGTATGCCAAAGGCATTCCGTTAGTTGTTAAAGTTTTGGCTCAACTTCTTCGTGGCAAACGAAAGGATATATGGGAAAGTCAATTGGAGAAACTTAAAAGAATGCCTAATAAGAAAGTTCTTGATATAATGCGGCTGAGCTATGACGATCTTGATCGTCAAGAGCAACAGATTTTCTTAGACATTGCCTGTTTTTTCAATGGATTGAAGCTCAAGTTGGAATACATAAACGTTTTACTGAAAGACCAAGATTATGCAGTGGCTGCTGGGATGGAAAGGCTGAAAGATAAGGCTCTTATAATTATTTCTGAGCACAATATTGTATCTATGCATGATATTATTCAAGAAATGGCTTGGGAGATCATTAAAGATGGCTCTGCTGAATACCCTGGAAACCAACTTCGGTTATGGGATTCTCACGACATATATCAAGGGAGTGAGGCCATTAGAAGCATATCCTTCAACTTTTCAGCAATTAAGGACCTTCAGTTAAGCCAAGAAGTCTTTGCTAAGATGAGCAAACTACGATTTCTAAATTTCTATAGCAACATATCTCAAGAGGCCATGTATAGTTCTGATGGACTTCCATCTTCGTGGAACAAAGGCCTGTGTCTTCCTCAAGGACTTGATTCTTTGTCAAATGAAGTAAGATACCTTAGCTGGATGCATTACCCTCTGGATTCCTTGCCAACCAACTTTTCTGCAGAAAATCTTGTAATATTGGACTTGTCCTTCAACCGAATGGAAAAACTTTGGTGTGGGGTGAAGAATCTGGCAAATTTAAGGATCCTTAGATTATATAATTCCTTACACCTGACCATGCTGCCAGACTTGTCGAAAGCCAGAAACCTTGAAATACTAGTTATTCGCAAGAGTTTCAGTTTCCTTTATGTACATCCATCTGTTTTTTGTCTCAACAAGCTTGAGATATTGGATCTAGGAGGGTGCGTTTCCCTTAGGCAGCTCCGAAGCTATATCCATTTGAGCTCTCTCCGTTCTCTCTCTCTCGTCGGCTGCGTAAGGCTACAGGACTTCTCAGTTACCTCAGAGAATCTGGAAGGGTTGAACTTAGAGCTCACAGGTATCCAACAACTACCGACATCCTTTGGGCGTCAAAGCAAACTCGAAACATTACATCTAGGATTGTCTGATATTCAGAGCATTCCTGAAACCATCAAGAATCTCACAAGGTTCAAGTATCTTAGCATCAGATATTGTTGGAACCTCAGGGATTTACCAGAGCTTCCCCCATCTCTTGAGTATCTAGACGCCACCGGATGCACATCACTCAAGACAGTGTTGTTTCCATCATCGGCTGCCTTGCAGCTTAAGGAAAACAGGAAAAGCATTTTGTTCTGGAATTGCTTGAAATTGGATCAACACTCCCTTGGGGCTATTGAATTGAATGCACGAATCAACCTCATGAAATTTGCATACCAGCATTTATCATCATTAACACATGACTACTATAAAGATAATGACAATGAAGCCATCTATGTGTATCCAGGAAGCAATGTTCCAAAGTGGTTGGAGTATAGAACATCACATGATTATGTAAATGTTGATATCTCTTCTTCGGCTGCGCCACATTCCCCTTCGTTGGGCTTCATATTTTGCTTCATTGTTCCACGAATCCTCTCGGATGGTTTTGCTTTCAGGTTTACCATAAGTATTGCTGAAGTTGAAGGAAACAATGTCAAATTTTACTTGGAGAAACCACTTGAAAAAATTGTTTCTGATCATGTGTTTCTCGTGTATGATCACCGGCTTACTCACTTCCTTAATAGCAGAAGCAATGTTGAAGTTCAACAGAGGCTTAAAATTAAGGTTGCGGCGGTGACACAGACAGGGAAATCAGATTATGTGCCTGTGAAGCTAAAAGGGTTTGGGATCAGTCCAATAAAAGCATCAGAATATCAAAATTTCATTCAGAAAATGGAATTGGTTGATAAGAGGACGAAACGAGCTGGTTCACTTACTTTGGTTGGAAATACTTCACTTGAAAGATTTTGCTTCCAAGACCAGAAAACTTACTTTGACTTCATTCAAGAAATCAACTACGTTGATGGTTGTTGGAAATTCAAACACCATCAATTCACTAATTATTCATATAGGTATTTTATTTGA	3450	0.3843	MYIFMLPNCDIEWCRSKLRQTGCTSLSPMASSKAFQIKLVVFVGLLLVSKFKGMEENMMSENSYSYTDKTLTFPAPQIKYDVFVSFRGTDIRQGLLSHLIKAFHLKQVFAFVDDKLERGDDISDALFGAIEKSLISLIIFSQDYVSSRWCLEELVKIVECREKDGQTVIPVFYKVDPSDVRYQKGTFANVFAEHEERYDMIKVQNWRTALKNSADLSGFHSTNFRNDAQLVDQIVDFISSRLNDMHQVKSKGLVGIHKPIAQLESLMLKESEGVRVIGIWGLGGIGKTTIAEEVYNRMCAEFESCCFLANVRKESERDGIMSLKKKLFSTLLNEQNLRIDLPKGLPDYVEKRLGRMKVLIVLDDVNDSDQLETLIGARDWFGLGSRIIITTRDKQVLVGEAEEIYQVEALDCDESLELFILNAFKQNQFEMEYCELSRRVVKYAKGIPLVVKVLAQLLRGKRKDIWESQLEKLKRMPNKKVLDIMRLSYDDLDRQEQQIFLDIACFFNGLKLKLEYINVLLKDQDYAVAAGMERLKDKALIIISEHNIVSMHDIIQEMAWEIIKDGSAEYPGNQLRLWDSHDIYQGSEAIRSISFNFSAIKDLQLSQEVFAKMSKLRFLNFYSNISQEAMYSSDGLPSSWNKGLCLPQGLDSLSNEVRYLSWMHYPLDSLPTNFSAENLVILDLSFNRMEKLWCGVKNLANLRILRLYNSLHLTMLPDLSKARNLEILVIRKSFSFLYVHPSVFCLNKLEILDLGGCVSLRQLRSYIHLSSLRSLSLVGCVRLQDFSVTSENLEGLNLELTGIQQLPTSFGRQSKLETLHLGLSDIQSIPETIKNLTRFKYLSIRYCWNLRDLPELPPSLEYLDATGCTSLKTVLFPSSAALQLKENRKSILFWNCLKLDQHSLGAIELNARINLMKFAYQHLSSLTHDYYKDNDNEAIYVYPGSNVPKWLEYRTSHDYVNVDISSSAAPHSPSLGFIFCFIVPRILSDGFAFRFTISIAEVEGNNVKFYLEKPLEKIVSDHVFLVYDHRLTHFLNSRSNVEVQQRLKIKVAAVTQTGKSDYVPVKLKGFGISPIKASEYQNFIQKMELVDKRTKRAGSLTLVGNTSLERFCFQDQKTYFDFIQEINYVDGCWKFKHHQFTNYSYRYFI	1149

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst9g01117	1149	SUPERFAMILY	Toll/Interleukin receptor TIR domain	76	219	IPR035897	-
	Arst9g01117	1149	PRINTS	Disease resistance protein signature	744	760	-	-
	Arst9g01117	1149	PRINTS	Disease resistance protein signature	352	366	-	-
	Arst9g01117	1149	PRINTS	Disease resistance protein signature	444	458	-	-
	Arst9g01117	1149	PRINTS	Disease resistance protein signature	276	291	-	-
	Arst9g01117	1149	Pfam	NB-ARC domain	265	488	IPR002182	GO:0043531
	Arst9g01117	1149	Gene3D	-	246	407	IPR027417	-
	Arst9g01117	1149	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	80	870	IPR044974	GO:0006952
	Arst9g01117	1149	SUPERFAMILY	L domain-like	596	945	-	-
	Arst9g01117	1149	Gene3D	Ribonuclease Inhibitor	773	904	IPR032675	-
	Arst9g01117	1149	SUPERFAMILY	"Winged helix" DNA-binding domain	479	585	IPR036390	-
	Arst9g01117	1149	Gene3D	-	409	493	IPR042197	-
	Arst9g01117	1149	ProSiteProfiles	TIR domain profile.	78	242	IPR000157	GO:0007165
	Arst9g01117	1149	Gene3D	Ribonuclease Inhibitor	555	772	IPR032675	-
	Arst9g01117	1149	Pfam	TIR domain	79	253	IPR000157	GO:0007165
	Arst9g01117	1149	SMART	till_3	79	216	IPR000157	GO:0007165
	Arst9g01117	1149	FunFam	Disease resistance protein (TIR-NBS-LRR class)	76	244	-	-
	Arst9g01117	1149	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	241	503	IPR027417	-
	Arst9g01117	1149	Gene3D	-	77	245	IPR035897	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst9g01117	Arst-Chr9	12564176	12568654	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst9g01117	80	865	WRKY Transcription Factor Family	AT4G12020	30.863	7.66e-98	341

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst9g01117	-		-	ahf:112776244	1704.49