Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01116 ATGACCATGTCACCGGAACAAATGAACATCGTCTTTGGCATACTCATAGTTGGAGCACTCATAATTGCCTTCACATTCTTCAGCTTCACCATGCTTGGATGGTGCAGTCACACTAGTGACATGCCGGCACCACCGGGAATATATTTGGACAACAAGTTCTCCGGCTGCGGCGGCGCGAGTTTGGAGTCGCACTCCATTACCTTCCAGTACAAGGTAGGTGGCTCTGTTGATGGAAGGAACCAAACAGAGTGTGTTATATGCTTGGCGCAGTTCGAAGAAGAAGAGAGTGTTCGGAAGCTTCACAGTTGCAAGCATGTTTTCCACACGTGTTGCATTGATAGGTGGCTTGGCTCTCATACCGGCTGCCCCTTGTGCCGGAGTCAGATCGACCAAGCCGCCGCTTCCCCAAATGGAAATAACCATATGATCTTGGTTTCTGTTGATTCCTGA 450 0.4956 MTMSPEQMNIVFGILIVGALIIAFTFFSFTMLGWCSHTSDMPAPPGIYLDNKFSGCGGASLESHSITFQYKVGGSVDGRNQTECVICLAQFEEEESVRKLHSCKHVFHTCCIDRWLGSHTGCPLCRSQIDQAAASPNGNNHMILVSVDS 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01116 149 SMART ring_2 84 125 IPR001841 -
Arst9g01116 149 Pfam Ring finger domain 83 126 IPR001841 -
Arst9g01116 149 ProSiteProfiles Zinc finger RING-type profile. 84 126 IPR001841 -
Arst9g01116 149 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 8 135 - -
Arst9g01116 149 SUPERFAMILY RING/U-box 79 133 - -
Arst9g01116 149 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 62 135 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01116 Arst-Chr9 12556596 12557045 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01116 69 132 C3H Transcription Factor Family AT4G33565 56.923 1.18e-17 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01116 - - adu:107464721 316.62