LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst9g01110	ATGGCACATGCATCTTTTTTCCGAGTATCACAGAAGGCCTATGTTGTATTTGTTTGTCTCTTGCTTATTCTGAAATCGAAGGGTGTGGCTTCTTCTTCCAAAAATGCCCTTAAGATAAAGTATGATGTCTTTGTTAGCTTCAGAGGCCCAGACATCCGCCGAGGTTTTCTTAGTCATTTGGTTGACGCACTTTCTAGAAAGAAAATTAACGGCTTTGTGGATGATAAAATTGAGGTAGGAGATGAAATACCAAAATCACTCATTAGAGCAATCGAGGCATCATTAATTTCACTAGTTATATTTTCACCAAACTATTCTTCTTCACACTGGTGTTTGGAGGAACTTGCAAAAATAGTTGAGTGCAGAGAAAAAGAAGGCCAGTTTGTGCTACCAGTTTTTCTTGACGTAGATCCCTCAGATGTGCGTCATCAAAGAGGATCCTATGGAGACGCATTTGTTAAACATGAGAAGAAACATGACTTGATCAAGGTTCAACGTTGGAGAACTGCTTTGCAAAGAGCTGCTAATTTATCTGGATTACATTCAACAAAATACAGGAATGACTATGGGCTCCTTGAAGCAATCACCAAACATCTGATAGAGAGATTGAATCATGAGCAGAAATATATCTCAAGAGGGCTTATTGGAATTGGCAAATCAATTGCACTCTTAGAGTCAGAATTGAACCCCGAGTTAGGAGACGTGCGTGCTTTGGGAATTTGGGGAATGGGGGGCTTGGGTAAGACAACTCTTGCATGGGAAGTGTTTAACAGCGTACGCTCACAGTACCAAGGTTCTTGTTTTCTGAGAAATGTAAAGGAAAGTTCAGCCAGGGAAGGAATATTTTCTTTGAAGAGCAAACTTTATTCTGAACTCATACGTGAACCAGGCTTAAAAATTGATAGCTCAAATGGATTGCCCCCTTTTCTTGAGAAAAGACTTGGTCGAATGAAGGTTATAATTGTTCTAGATGATGTCGATGGTTTTCGGCAACTGAAAATACTATTTGGAACAAGGGAACAATTTGGACCAGGTAGTAGAATCATTGTAACATCCAGAGATAAGCAAGTGCTCCATACAGAAGTTGATTTTATCTACGAAGTTAAGCCATTACAAGTTGATGAGGCGCTTCAGCTTTTCAATTCGATTGCCTTCAAACATGAACATCGTGATCTTGAGAAGGAATTTCATGAGCAATCAAAAAAGGTGATCGAGTATGCCAAAGGTGTTCCATTAGTCCTTGAAGTTCTGGGCCACCATGTCCATGGAAAAGGGAAAGAAATGTGGGAAAGCCTGTTAGAGAAGCTTAAAAATATGCCAGACAAAGAGGTCCATAATGTGATGAAACTCAGTTATGATGATCTTGATCGGGATGAGAAAAAGATATTCTTGGATATTGCTTGTTTTTTCAAATGGGTGCTAGAGGATGATATAAAACTACTTTTGAAGGATGAGATCAATTCTGTGGCTTTTGTGTTAGAAAGGTTAAAAGACAAAGCCCTCATAACTGTTTCTGAAAGAACTATTGTATCCATGCATGACATTATTCAAGAAACAGCACTCGAGATTGTTCGTCAAGAATCTATTGAAGACCCTGGAAAACGAAGCCGATTATGGGGATCTAATGACATTTATCAAGTGCTAAAAGGTGATAAGGGGAGTGAAGCCATTAGAAGCATCTCCGCCAATTTGCCATTGCTTAATAAGAAGCTGCAGCTAAGCCCTCAAGTATTTGCAAAGATGAGCAACCTACACTTTTTGGAAATTTTAGCTCCTTACACGTGTCCTTCTTATTTCCCACAAGATCAAATGAGTTTGTATTTTCCTGAAGGGCTTGAGTCTTTGCCTAATGAACTAAGGGTTCTTCATTGGATACACTACCCTATGGAAGCCTTGCCAACTCAGTTTTCTGCTGAAAATCTTCAAATACTCTCCTTGCCCGTTAACCGAGTGAAAAAACTTTGGCATCAAGAGCAGAATCTTGGAAGTTTAAAGGTAGTTAGCCTTGTATGTTCCACCCAATTAACAGAGTCACCAGACTTTTCAAATGCAACAAATCTTGAAGAGCTTGGTTTCAGATCGAGTTCAAAGTTAATTCATGTACATCCATCTGTTTTCACTTTAGAGAAACTCACGGCTTTGTACCTTTCAAACTGCGTTTCCCTTACAAGCCTTACAAGTGATACTCATTTAAGGTCCCTTCGCTCTCTCTATCTCGATGGCTGCACAGCACTGAAGGAATTTTCTGTTATTTCAATGAATATGGTATACCTGTATTTAGATCACACAGGGATCAAACAACTGCCTGCATCTATTGGAATTCAAAGCAAACTTGAAGTGCTAAGTCTAGCAAACAGTACTATTGAGTACTTGCCTGAAAGCATTAAGCACCTCTTGAGGCTGAGACGCTTAAATTTAAGGGATTGCAGGGAGCTTCAAACTCTACCGAAGCTTCCCCCTAACATCGAATACCTAAATGTTGAAGGTTGCATATCACTGAAGACCGTGTTGTTCCCTGTGACTGTAGCTGAACAAATGAAGGAAGAAAGGGAAAAGGTTGCATTCTGGAATTGTCTGGCATTGGATCAACACTCTCTTGAGGCTATTGGCTTGAATGCACAAATCAACATGATGAAATTTGCATATCAACATTTGTCCAGATTTGAAAGTGACAGTTACCAAGATTATGATGCAGATTATGATGCTCATGGAGCCACCTATGTGTATCCGGGAAGCAGAATTCCGAAGTGGTTATTGCACAGAACAATTGGCGATCACATAACCATTGATGTCCCATTTGGTCTGCCTTCCAGTCAGTTAGGCTTCATTTTTGCTTTCATTATTCCGAAAGTTGCATCTGAAGGTTTGTTTTTAAACTTTAGCCTCAGTGTTGGTGATGATGAGGATGAAGGGAACAGTATCAAGTTGCGCTTGCCTAGGCCAGGTCAAGAAATTGCATCGGACCACGTGTATCTGATGTATTACGTGGCATGCTCTAACTACCTAAGTAGTAAAGCCAAATCTCAGGCACAGTTTGAAATTAAGGTTAGTGTGGCATCAGAGTACACGCCGTTGCTATTGAAAGGATTGGGGGTCAGCCTAATCAATGTGGCAGAATATCAGAGTTTCGTTCAACAAATGAAATGGCTTGACACAACTTCAGATACCATTTTTAATTGGTCAATAACAAGAGAAATGGATTCATATAATTGTGAACCTTCATATCAGAATTGTTCTCTTGAATTTGGGAAATTCTATGGTACGCAGTGCTTATTTCAACAACATGTGCACGCGCGCTTGGAGCAGGCCGAGGAAGGGATATGTTAG	3327	0.3998	MAHASFFRVSQKAYVVFVCLLLILKSKGVASSSKNALKIKYDVFVSFRGPDIRRGFLSHLVDALSRKKINGFVDDKIEVGDEIPKSLIRAIEASLISLVIFSPNYSSSHWCLEELAKIVECREKEGQFVLPVFLDVDPSDVRHQRGSYGDAFVKHEKKHDLIKVQRWRTALQRAANLSGLHSTKYRNDYGLLEAITKHLIERLNHEQKYISRGLIGIGKSIALLESELNPELGDVRALGIWGMGGLGKTTLAWEVFNSVRSQYQGSCFLRNVKESSAREGIFSLKSKLYSELIREPGLKIDSSNGLPPFLEKRLGRMKVIIVLDDVDGFRQLKILFGTREQFGPGSRIIVTSRDKQVLHTEVDFIYEVKPLQVDEALQLFNSIAFKHEHRDLEKEFHEQSKKVIEYAKGVPLVLEVLGHHVHGKGKEMWESLLEKLKNMPDKEVHNVMKLSYDDLDRDEKKIFLDIACFFKWVLEDDIKLLLKDEINSVAFVLERLKDKALITVSERTIVSMHDIIQETALEIVRQESIEDPGKRSRLWGSNDIYQVLKGDKGSEAIRSISANLPLLNKKLQLSPQVFAKMSNLHFLEILAPYTCPSYFPQDQMSLYFPEGLESLPNELRVLHWIHYPMEALPTQFSAENLQILSLPVNRVKKLWHQEQNLGSLKVVSLVCSTQLTESPDFSNATNLEELGFRSSSKLIHVHPSVFTLEKLTALYLSNCVSLTSLTSDTHLRSLRSLYLDGCTALKEFSVISMNMVYLYLDHTGIKQLPASIGIQSKLEVLSLANSTIEYLPESIKHLLRLRRLNLRDCRELQTLPKLPPNIEYLNVEGCISLKTVLFPVTVAEQMKEEREKVAFWNCLALDQHSLEAIGLNAQINMMKFAYQHLSRFESDSYQDYDADYDAHGATYVYPGSRIPKWLLHRTIGDHITIDVPFGLPSSQLGFIFAFIIPKVASEGLFLNFSLSVGDDEDEGNSIKLRLPRPGQEIASDHVYLMYYVACSNYLSSKAKSQAQFEIKVSVASEYTPLLLKGLGVSLINVAEYQSFVQQMKWLDTTSDTIFNWSITREMDSYNCEPSYQNCSLEFGKFYGTQCLFQQHVHARLEQAEEGIC	1108

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst9g01110	1108	Gene3D	-	38	200	IPR035897	-
	Arst9g01110	1108	Pfam	NB-ARC domain	236	452	IPR002182	GO:0043531
	Arst9g01110	1108	SUPERFAMILY	Toll/Interleukin receptor TIR domain	33	179	IPR035897	-
	Arst9g01110	1108	Gene3D	Ribonuclease Inhibitor	557	724	IPR032675	-
	Arst9g01110	1108	SMART	till_3	40	177	IPR000157	GO:0007165
	Arst9g01110	1108	Gene3D	-	201	364	IPR027417	-
	Arst9g01110	1108	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	41	749	IPR044974	GO:0006952
	Arst9g01110	1108	PRINTS	Disease resistance protein signature	313	327	-	-
	Arst9g01110	1108	PRINTS	Disease resistance protein signature	407	421	-	-
	Arst9g01110	1108	PRINTS	Disease resistance protein signature	729	745	-	-
	Arst9g01110	1108	PRINTS	Disease resistance protein signature	237	252	-	-
	Arst9g01110	1108	Pfam	TIR domain	40	208	IPR000157	GO:0007165
	Arst9g01110	1108	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	204	466	IPR027417	-
	Arst9g01110	1108	Gene3D	Ribonuclease Inhibitor	727	848	IPR032675	-
	Arst9g01110	1108	FunFam	Disease resistance protein (TIR-NBS-LRR class)	37	205	-	-
	Arst9g01110	1108	Gene3D	-	371	456	IPR042197	-
	Arst9g01110	1108	SUPERFAMILY	"Winged helix" DNA-binding domain	443	549	IPR036390	-
	Arst9g01110	1108	ProSiteProfiles	TIR domain profile.	39	203	IPR000157	GO:0007165
	Arst9g01110	1108	SUPERFAMILY	L domain-like	570	837	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst9g01110	Arst-Chr9	12409158	12417825	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst9g01110	31	816	WRKY Transcription Factor Family	AT4G12020	33.333	1.13e-106	366

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst9g01110	-		-	adu:107464785	2168.66