Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01095 ATGGACCATTTCGTGAGTTCATTGTTTTTGCAAGATGAAAATGTGCGTGCCGACAATGATCCTTTGGCATGGGAGGACATTGAGGGTTGTCGTGTTTCTGAAAATTATGCCGAGGAAGTGCAGGGTGTTGATAGTAATGTCGATAAATTTTTTAATGACACCTTCTATGACAACTGGGATGAAAGAGCATTTGACGGTATTGATGAGCTTGGGTATATGAATCTGAAAGAAATAACTGCAAGTGAGGTTAGGTTGTTACATTTTCGGGATCAGACTGTTGCATTTTCTTTCTACCAATTGTATTCAAAGATGAACGGTTTTGCTGTTAGAAAGAATAGGATTAGAAGGAATGTCAAAAACGAGGTGACACAACAACAATTTATTTGCTTTTGGGACGGGTTTAGAGATACGGGGCCTGAGAATGATTCCCATCGACGCAAATGCGAGCCAAAGCCTGAGACTAGATGCGGATGTCTGGCTGAAATGCGTGTTCATACTATCATTTTGTTTGGGGATGTGTTAGCATTCGATGCGACTTATTGTAAGAACAGGTACATATGCCCGTTGGTTGTATTTTCTAGGGTTAATCATCATAACCAAACCATTGTGTTTGCCGCAATGCTTGTTGCGAATGAGAAGGAGGAGACATATACATGGTTGTTAAAACAATTTCTTGAGGCTATGAAGGGCAAAGCACCAGGTTGTGTAATAACTGACTGGGACAATGCCATGAAAAAAGCAATCGAATCTGTGTTTCCGAGTGCTTACTATCGGTTATGTGCATGGCATTTACTTAGGAATGCAACCTCTAATCTTAGCAATCCGACGTTCACATCTGAATTTAAGAAGTGCATGCTTTTTTATTATGAGATTTCAGAGTTCGAAGATTGGTGGGTCAAATTGGTTACGGAGCTTGGTCTTCAACATAATGAATGGGTTTGTGACTTGTATGCTAGGAGGAAAATGTGGGCAACTGCTTACATTCACGGGCATTTCTTTGGTGGGTTTCGAACAACATCAAGGTGTGAGAGATTGCATTCTATGCTCAGTAAATTCGTGCACTCTCGACATAACTTGAGAGGCTTTATTGAACAGATCTTGCGATGTATATGTCAAATGAGGTTAAGGGAAGCACAAAGTGAGTTGGCATCTGTTGTTGGGGATTTAGTGTTGCAAAGTCCACTACATGCATTGGAAAGATCTGCCGCCAACACACTGACAAGAGAGATTTTCATGTTATTCAGGCCAATGTTGACAAGAGCTTGTACGCTAAAGGTGTGTTCATGTACATTGACACCAAGTTGTGAGATTTATACACTATCCAAGTCAGGAAATCCTAATAAAGAATGGAACGTGTCTCACTATCAGGACAGATCAATATTTAAGTGCTCTTGCTTCAGGATGGAATCACTTGGCATACCTTGTGATCATATCGTGGCAGTTCTAGTACATCTTGATGCGAAAGAGATACCAAAGAGTCTTCTTATAGATCGATGGTCGAAAAATGCTCGGTTAAAAGTGTGGGAATTTATGGAAAATGGACCCTTTTGTTGGGAATCTTGA 1563 0.405 MDHFVSSLFLQDENVRADNDPLAWEDIEGCRVSENYAEEVQGVDSNVDKFFNDTFYDNWDERAFDGIDELGYMNLKEITASEVRLLHFRDQTVAFSFYQLYSKMNGFAVRKNRIRRNVKNEVTQQQFICFWDGFRDTGPENDSHRRKCEPKPETRCGCLAEMRVHTIILFGDVLAFDATYCKNRYICPLVVFSRVNHHNQTIVFAAMLVANEKEETYTWLLKQFLEAMKGKAPGCVITDWDNAMKKAIESVFPSAYYRLCAWHLLRNATSNLSNPTFTSEFKKCMLFYYEISEFEDWWVKLVTELGLQHNEWVCDLYARRKMWATAYIHGHFFGGFRTTSRCERLHSMLSKFVHSRHNLRGFIEQILRCICQMRLREAQSELASVVGDLVLQSPLHALERSAANTLTREIFMLFRPMLTRACTLKVCSCTLTPSCEIYTLSKSGNPNKEWNVSHYQDRSIFKCSCFRMESLGIPCDHIVAVLVHLDAKEIPKSLLIDRWSKNARLKVWEFMENGPFCWES 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01095 520 ProSiteProfiles Zinc finger SWIM-type profile. 450 486 IPR007527 GO:0008270
Arst9g01095 520 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 87 504 IPR031052 GO:0006355
Arst9g01095 520 Pfam MULE transposase domain 173 267 IPR018289 -
Arst9g01095 520 SMART 26again6 461 488 IPR006564 GO:0008270
Arst9g01095 520 Pfam FAR1 DNA-binding domain 96 165 IPR004330 -
Arst9g01095 520 Pfam SWIM zinc finger 463 485 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01095 Arst-Chr9 12225439 12228871 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Arst9g01095 MULE 3.6e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01095 - - ahf:112708893 1046.96