Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01086 ATGGGCAGACGTCCTTGCTGCTCGAAAGAGATGAACAAAGGTGCTTGGTCAAGAGATGAAGATCAAACCCTCTCCAAATATGTTGCCATTCATGGTGAAGGAAAATGGCAAAAGGTTGCCCAAAATGCCGGCTTGAATAGGTGTGGGAAAAGTTGCAGACAGAGATGGTTGAATTATCTGAAGCCAGGCATTAAGAGAGGCGACATATCTCAGGATGAAGAGGATATGATCATAAGGTTACATCGTCTTCTCGGTAACAGATGGGCCTTGATAGCGAAGAGATTGCCGGGACGAACAGACAATGAAATCAAGAATTACTGGAATACCAATCTCTCAAAGAAGCTTCAACAACAACAACAACAATGGCAGCCACCTCCTCCTTCTTCATCTTCTTCCCATAAACACAAAAACAATAATCTTACTCACAAACATGTACTAGTACCACCCCAAACTCCAATTCCTAGAAGACTCAAAGCTTTTCACTACAATAATAATAATAATAATAATAATAATAATAATAATAATAACACTTCATCAATTAGTCCCTGCAGTGATGATAATAGTGAAGAAGCTTCTCTCACTGATTTTCTCATTGACATTGATGATAATGATGATGATCAAATGCTGTCGGTTACTGATAATGACGACGATCACCGCCATAACTCGAAGCTGCTCGAAGAACAGAGCAATCCAAGCTCATCATCACTATTATCATCGTCAGATCAATGTAACAACTTGTTTATGTCTGAGAAATTTGACCCTTTGGAGACACTTTTGGATGTGGAGCTAAAAAGGGTGGCTTCATTTCTTGGACTCAAAAATTGA 825 0.3939 MGRRPCCSKEMNKGAWSRDEDQTLSKYVAIHGEGKWQKVAQNAGLNRCGKSCRQRWLNYLKPGIKRGDISQDEEDMIIRLHRLLGNRWALIAKRLPGRTDNEIKNYWNTNLSKKLQQQQQQWQPPPPSSSSSHKHKNNNLTHKHVLVPPQTPIPRRLKAFHYNNNNNNNNNNNNNNTSSISPCSDDNSEEASLTDFLIDIDDNDDDQMLSVTDNDDDHRHNSKLLEEQSNPSSSSLLSSSDQCNNLFMSEKFDPLETLLDVELKRVASFLGLKN 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01086 274 CDD SANT 70 111 IPR001005 -
Arst9g01086 274 SMART sant 65 113 IPR001005 -
Arst9g01086 274 SMART sant 12 62 IPR001005 -
Arst9g01086 274 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Arst9g01086 274 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 115 IPR017930 -
Arst9g01086 274 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 64 IPR017930 -
Arst9g01086 274 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 215 - -
Arst9g01086 274 MobiDBLite consensus disorder prediction 160 188 - -
Arst9g01086 274 SUPERFAMILY Homeodomain-like 11 107 IPR009057 -
Arst9g01086 274 Gene3D - 69 144 - -
Arst9g01086 274 FunFam MYB-related transcription factor 12 65 - -
Arst9g01086 274 CDD SANT 15 60 IPR001005 -
Arst9g01086 274 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Arst9g01086 274 MobiDBLite consensus disorder prediction 113 135 - -
Arst9g01086 274 FunFam Transcription factor TT2 69 143 - -
Arst9g01086 274 MobiDBLite consensus disorder prediction 113 137 - -
Arst9g01086 274 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Arst9g01086 274 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Arst9g01086 274 Gene3D - 6 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01086 Arst-Chr9 12151315 12154526 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01086 1 115 MYB Transcription Factor Family AT2G16720 63.793 3.43e-53 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst9g01086 Myb_DNA-binding 4.1e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01086 K09422 - gmx:100101858 288.885