Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01085 ATGGGAAGGAGTCCTTGCTGTTCTAAGGAAGGTTTGAACAAAGGAGCATGGACTGCTATGGAAGACAAAATTCTCACAGACTACATTAAGATTCATGGTGAAGGAAAATGGAGACACTTACCCAAAAGAGCTGGGCTTAAGAGATGCGGAAAAAGTTGCAGGCTGAGATGGTTGAATTATCTAAGACCTGGCATTAAAAGAGGAAATATTACTCACGATGAAGAAGAGCTTATAATCCGCCTTCACAACCTTCTCGGAAACAGGTGGTCCTTGATTGCTGGGAGGCTTCCAGGACGAACAGACAATGAAATCAAGAACTATTGGAATACCAACATTGGAAGAAAGCTTCAAAATGGTACCCAAAATTGTTCATCATCAAACTTGCTCCAACTGGATCCGAACCCGAATCCAAAAACCCGAGAATGGCCATGCCCTAATAATTACCTACAAAATAATATTGGTTCTTGTTTGGTCCAGACTAAAGCCACAAGATGGCCTAATAATAATAAGGTCATACTCACCAAAGAAATTATCACAAAACAAAATAATGAAGGCATGGTTCATAATCATCACATTAATAATAATGTTAATGCCACGGATTACAAGATGAAGGGTTCATCGTTTTCGTCTCCAGTGTCACCATCTTCAGAGAGTAACACCAATATCGACGACGACAACAACAATAACAACAACAAAAACATCGAGGAAGCGTTGGATTTCATGGCGGATTTTCAAACGGAGGGAAATAATCTTTATTCGGAGCTTCTCAAGATGGACTTTGCAGAAGCATCATCATGTTTGGAAAATAACATGTTGGAAGGAAGTGGTAATAATAATAATAATAATAATAACAAACATATTAGCACAGTTGATAAAGCAGTAGGGCAGTTATATCCAAAATTATCATTCAATGACACCCATTTCCATTGGCCTTGGAGTGATTCATTGTATGATACGGATTTTGATTTTCAACACATGGAAAATATTATAGAGTCTGGATTTGATTGGCTTTGA 1014 0.3807 MGRSPCCSKEGLNKGAWTAMEDKILTDYIKIHGEGKWRHLPKRAGLKRCGKSCRLRWLNYLRPGIKRGNITHDEEELIIRLHNLLGNRWSLIAGRLPGRTDNEIKNYWNTNIGRKLQNGTQNCSSSNLLQLDPNPNPKTREWPCPNNYLQNNIGSCLVQTKATRWPNNNKVILTKEIITKQNNEGMVHNHHINNNVNATDYKMKGSSFSSPVSPSSESNTNIDDDNNNNNNKNIEEALDFMADFQTEGNNLYSELLKMDFAEASSCLENNMLEGSGNNNNNNNNKHISTVDKAVGQLYPKLSFNDTHFHWPWSDSLYDTDFDFQHMENIIESGFDWL 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01085 337 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Arst9g01085 337 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Arst9g01085 337 MobiDBLite consensus disorder prediction 203 230 - -
Arst9g01085 337 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Arst9g01085 337 CDD SANT 16 61 IPR001005 -
Arst9g01085 337 Gene3D - 70 132 - -
Arst9g01085 337 Gene3D - 14 66 - -
Arst9g01085 337 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Arst9g01085 337 SMART sant 13 63 IPR001005 -
Arst9g01085 337 SMART sant 66 114 IPR001005 -
Arst9g01085 337 FunFam MYB-related transcription factor 13 66 - -
Arst9g01085 337 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Arst9g01085 337 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Arst9g01085 337 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 251 - -
Arst9g01085 337 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Arst9g01085 337 CDD SANT 71 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01085 Arst-Chr9 12104705 12108946 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01085 1 116 MYB Transcription Factor Family AT2G16720 77.586 3.00e-62 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst9g01085 Myb_DNA-binding 1.2e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01085 K09422 - gmx:100809225 348.206