Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01081 ATGAGCAATTGGTTGGGGTTTTCTCTGACTCCACACCTGAGGATTGATGAAGAATTTGAGAGACAAAATGAAGAGCGTGGAAATGGAGGATCTTATCCTCCTCCTGTGATGCCTTTGCGCTCTGATGGCTCTCTCTGTGTTGCTGACTCCTTTTCTCGCTCTGCTGCACCTCATGAATGGAGATATGAGAATGCAATGGGAAGTGGAAATTCAAATGAAGAAGGTCCAAAGCTTGAAGACTTCTTAGGATGCTACTCAAATCCATCACCACTTGCGGAAACCAAAGCATTTTGTCAGCAAAACCGAAACCAAAACCAACAAAACAACTTCTCAAAGATGAATATGAATGTTGAAACATCATCGTCACTGTTCCAATCATTCAATCCCTACAATGATAGCAGAAGCAACCACAACCATCATCATCATCATGCTCTCATAGCGGGCAACGGGGTTTACAAGTCATCATGGTTGGCACAAACTTGTTGCTCATCTTCATCTTCAGCGGAGGCAAATCAAAATAGTAGTAGCAATAATAATAATAATAATGGTGGGTGCAATTTCCAATCTCTGTCACTGACTATGAGTCCGAGCAGTGTTCAACAACAAGAACAAAATGGTGGGGTGGTGGTGGTGAGTGGAATGAACCACCAAGTAGTGCTTCATAATCAACATAATCAGGTTGATGATGACACTCGTAAAAGATCCATTGCTAAATCTCAAGGGAGAGAACCGGTGCCTCGAAAATCTATTGACACTTTTGGCCAGAGAACTTCTCAATACCGTGGTGTTACAAGGCATAGATGGACGGGTAGATATGAGGCCCATTTGTGGGATAATAGTTGCAGAAAGGAAGGACAAACAAGAAAAGGAAGGCAAGTTTACCTTGGTGGTTATGACAAAGAAGAAAAAGCAGCAAGAGCTTATGACTTAGCTGCACTCAAGTATTGGGGTCCAACAACTCACATAAATTTCCCTTTAAGCACTTATGAGAAGGAACTTGAAGAGATGAAGCACATGAACAGACAAGAATTTGTCGCCAATTTGAGAAGGAAGAGCAGTGGATTTTCAAGAGGGGCATCTGTGTATAGAGGCGTGACAAGGCACCATCAACATGGAAGGTGGCAAGCTCGTATAGGAAGGGTTGCAGGCAACAAGGACTTGTATCTTGGTACATTTAGTACACAAGAAGAAGCTGCAGAAGCATATGATATTGCAGCAATCAAGTTCAGGGGAACAAGTGCCGTGACCAATTTCGACATAAGCAGGTACGACGTGAAGAGGATTTGCTCGAGTTCGACCCTAATCGCCGGAGACCTTGCAAAACGGTCTCCTAAAGACTCAGCTCTGGCCACCGCCGAGGACTTCAACTCATCCGGTTCGGCCGCCACACCTTCTCAACCAACTCCCCTGGCAATAACTGATGGTGAACAACACTCTGATGAGTTGTCCAACATGGTGTGGAATGGCAACAGCGACGAGCAACAGCAGAATGAGAGCGGAACCATCAACAGAAATGTCGCCGGTCCATTGTCGCAGCAGGTTTCGCCAAGCAACAAGAACGAGGCGAACCCGCCGCAAAGCCCCAATGAATTTGGGGTCAATGGAACGGATTATGGACATGGATATTTCACTCTGCATGGACCACCAAAATATGATGATGGAAACAATGAAAATGAACACAGGATTGGGAATTTGGGTTTGGTTAATCAAGTTCCTATGTTTGCTTTGTGGAATGAATGA 1740 0.4454 MSNWLGFSLTPHLRIDEEFERQNEERGNGGSYPPPVMPLRSDGSLCVADSFSRSAAPHEWRYENAMGSGNSNEEGPKLEDFLGCYSNPSPLAETKAFCQQNRNQNQQNNFSKMNMNVETSSSLFQSFNPYNDSRSNHNHHHHHALIAGNGVYKSSWLAQTCCSSSSSAEANQNSSSNNNNNNGGCNFQSLSLTMSPSSVQQQEQNGGVVVVSGMNHQVVLHNQHNQVDDDTRKRSIAKSQGREPVPRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEEKAARAYDLAALKYWGPTTHINFPLSTYEKELEEMKHMNRQEFVANLRRKSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGTSAVTNFDISRYDVKRICSSSTLIAGDLAKRSPKDSALATAEDFNSSGSAATPSQPTPLAITDGEQHSDELSNMVWNGNSDEQQQNESGTINRNVAGPLSQQVSPSNKNEANPPQSPNEFGVNGTDYGHGYFTLHGPPKYDDGNNENEHRIGNLGLVNQVPMFALWNE 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01081 579 PRINTS Ethylene responsive element binding protein signature 260 271 IPR001471 GO:0003700|GO:0006355
Arst9g01081 579 PRINTS Ethylene responsive element binding protein signature 401 421 IPR001471 GO:0003700|GO:0006355
Arst9g01081 579 MobiDBLite consensus disorder prediction 223 245 - -
Arst9g01081 579 CDD AP2 360 421 IPR001471 GO:0003700|GO:0006355
Arst9g01081 579 MobiDBLite consensus disorder prediction 222 249 - -
Arst9g01081 579 MobiDBLite consensus disorder prediction 450 539 - -
Arst9g01081 579 SMART rav1_2 259 331 IPR001471 GO:0003700|GO:0006355
Arst9g01081 579 SMART rav1_2 361 425 IPR001471 GO:0003700|GO:0006355
Arst9g01081 579 CDD AP2 258 327 IPR001471 GO:0003700|GO:0006355
Arst9g01081 579 SUPERFAMILY DNA-binding domain 258 327 IPR016177 GO:0003677
Arst9g01081 579 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 72 498 - -
Arst9g01081 579 SUPERFAMILY DNA-binding domain 360 421 IPR016177 GO:0003677
Arst9g01081 579 FunFam AP2-like ethylene-responsive transcription factor ANT 258 327 - -
Arst9g01081 579 Gene3D AP2/ERF domain 258 327 IPR036955 GO:0003700|GO:0006355
Arst9g01081 579 Gene3D AP2/ERF domain 361 421 IPR036955 GO:0003700|GO:0006355
Arst9g01081 579 ProSiteProfiles AP2/ERF domain profile. 361 419 IPR001471 GO:0003700|GO:0006355
Arst9g01081 579 Pfam AP2 domain 259 317 IPR001471 GO:0003700|GO:0006355
Arst9g01081 579 Pfam AP2 domain 360 411 IPR001471 GO:0003700|GO:0006355
Arst9g01081 579 ProSiteProfiles AP2/ERF domain profile. 259 325 IPR001471 GO:0003700|GO:0006355
Arst9g01081 579 MobiDBLite consensus disorder prediction 450 533 - -
Arst9g01081 579 FunFam AP2-like ethylene-responsive transcription factor 360 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01081 Arst-Chr9 11973891 11980192 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01081 1 447 AP2-EREBP Transcription Factor Family AT1G72570 52.381 2.31e-140 411
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Arst9g01081 AP2 4.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01081 K09285 - gmx:100809762 799.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g01081 9 11973891 11980192 Arst9g01081 9 11973891 11980192 ECH