Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01078 ATGGTTATCCCCATCCGTGTCTTTTTGTCACCTAAACCATGTAATCTTGCTCTTCCTCTTCACCATTTTCCTCGACAACATCGGTGTCATGGCCTTTTTGGTGCTAACCTTGGTAACACCGGCATTCGGGATGATGTCGCCGACATTTGTCAAAGGAAGCGTTTCGGCATTCGTCCAAGGAAGTGTATCCTGAAAGGAAGGATTGATGATCAAATGTCAGGGCAGCGAGAAACGCTAGCCGGATTAACACTTGACGACGTCTTAGCAAAGCAGAAAGCATTTTACCACTCACAATCCAACACCAAAACCCTCCTTGATATCCTCAAAGACGACGTCTCCTTCAATAAGAACCGCAAGTCTTGGAAAGCATTCAAGGACACGCTTCTGCTAAAGCGTTACGGCTCTGCTTGGACTCGAATTCCCACTTCCGACATTCCCATCTCATTCTGCCGCCGCACCTCTCTCAAACACTTTCAATCCATGGCTGACAACACCGACAACGTTGATGAAGTCCCAGCCTTACCTCCCGCTTCACTCGCACCCAAGGCCACCTTCTCCCGCCGGAGTTCCACCCGCTACAGCTCCCCGTCCGAGGTCACATTCACTGCCGGCGATCCCACGGAGCCGGCCCCTGCCGGCAGCGCGCTACTCCGGCCTCAGCTTTCGCGACGGAACTCCTCCGGCATGGTGTCGGAGCCATTCCGGAAGGGCCGCGTGGTGACGTTCCGGGACAACTTGGACGACGAGGAGCAGGACGAGGAGGACGGGTCACGTGCGGATGGCAGCAGGACACTATCAGCAAGAGAGGCGGTTGCAGCACAGGAGGCGGCGGAGGCGGCTGCTGCAGGGGAGGTTGTTGGAGAGGGAGAGGAAGACGAGGCGACGCAGCCAGTGATGATGTCACTGATGGACTTGTTGGAGGAGACTGACAGAGAGATGGGGCTTGAAGGATCGAGGTACATTCTGAGTGATGAAGAGGATTTTGACGAGGATGAGGAAGATGAGGATGGTGATGGTGATGACTTGGAATACACGTGCTCAGTGTGCATGGTGAGGCATAAGGCTAATGCTATCAGCCGCTGTGGCCACTCTTACTGCAGGATGTGCTCTAGGGAACTCATGGCTGGCAAAGGCAACTGCCCTCTCTGCAACAATTTCGTTGTTGAGATTCTTGACATCTTTTGA 1185 0.5392 MVIPIRVFLSPKPCNLALPLHHFPRQHRCHGLFGANLGNTGIRDDVADICQRKRFGIRPRKCILKGRIDDQMSGQRETLAGLTLDDVLAKQKAFYHSQSNTKTLLDILKDDVSFNKNRKSWKAFKDTLLLKRYGSAWTRIPTSDIPISFCRRTSLKHFQSMADNTDNVDEVPALPPASLAPKATFSRRSSTRYSSPSEVTFTAGDPTEPAPAGSALLRPQLSRRNSSGMVSEPFRKGRVVTFRDNLDDEEQDEEDGSRADGSRTLSAREAVAAQEAAEAAAAGEVVGEGEEDEATQPVMMSLMDLLEETDREMGLEGSRYILSDEEDFDEDEEDEDGDGDDLEYTCSVCMVRHKANAISRCGHSYCRMCSRELMAGKGNCPLCNNFVVEILDIF 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01078 394 ProSiteProfiles Zinc finger RING-type profile. 346 384 IPR001841 -
Arst9g01078 394 SUPERFAMILY RING/U-box 345 390 - -
Arst9g01078 394 PANTHER OS01G0917900 PROTEIN 75 394 - -
Arst9g01078 394 Pfam Zinc finger, C3HC4 type (RING finger) 344 386 - -
Arst9g01078 394 CDD RING-HC 344 383 - -
Arst9g01078 394 SMART ring_2 346 383 IPR001841 -
Arst9g01078 394 MobiDBLite consensus disorder prediction 181 296 - -
Arst9g01078 394 MobiDBLite consensus disorder prediction 183 202 - -
Arst9g01078 394 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 322 394 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01078 Arst-Chr9 11917492 11922340 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01078 78 394 C3H Transcription Factor Family AT3G07120 32.964 1.65e-39 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01078 - - adu:107464709 710.679