Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01071 ATGATGAGTGGAAGTTTAAGTGGTAGTGCAAGGAACAGTAGTAGGTCTCCTTTCACCCCAAATCAGTGGCAAGAACTTGAACAACAAGCTCTTGTTTTTAAATACATGGTTACAGGTACCCCAATCCCACCAGATCTCATATTCTCAATTAAAAGAAGCCTAGACTCCTCAATATCTTCAAGACTCTTCCCACACCATCCAAGTGGTGCAGTTGGGTATGCATATTTTCAAATGGGGTTTGGCAGAAAAGTAGACCCGGAGCCAGGAAGGTGCAGAAGAACAGATGGCAAGAAATGGAGGTGCTCAAAGGAAGCATATCCAGATTCTAAGTACTGTGAAAGGCACATGCATAGAGGCAGGAACCGTTCAAGAAAGCCTGTGGAAATTTCTTCATCATCAACCACAAACACAAACACAAACACAAACAACAACAACAACACTTCCTCTTCTCAAGTCATGAATCATCATCATCAATCTTCTTATACTGTTAACTGCAGCAATGATAGCAATAATAATAATAACATGGCTTCTTCAACAGCTTGTTCTTTCAGTTTCAACCCATCTGAGTCACAGCAGCAGCATCAATACTTCTCCCAATCTTACCAAAACCCCTTCTTTTACACCCAATCAACGTCTTCTTCTTCTTCTTCCAAACACCATGATGCTGATTTTCCTCCTCATGATGCCACCACACACCACTTATTCATGGACTCCGGCTCTTATTCTCATGATCAAAAGGACTATAGGCATATTCATGGAATGAGGGAGGATGTGGATGAAAGAGCTTTCTTTCCAGAAGCTTCTGGTTCAGCCAGGAGCTACCTTCATGACTCATATCAGCACCATCACCAACAACAACAACAACAACAGCAGCATCTATCAATGGGTTCCTACAAGAACTACTCATCAAATTCCCATTTCCAAATCATGAACAACAATAATAATAACGACGATCCAAGAAACCAAGAGCAACATTGCTTTGTGTTGGGGACAGACTTCAAATCAACGAGCAAAGAGAAAGACAACACTGAGAAAACAACATCAACAACACAGCAAAGACCCCTTCACCACTTCTTTGGTGAGTGGCCACCAAAGAACACTGATTCATGGCTTGATCTTGCTTCCAACTCTAGAATACCCTCC 1143 0.4182 MMSGSLSGSARNSSRSPFTPNQWQELEQQALVFKYMVTGTPIPPDLIFSIKRSLDSSISSRLFPHHPSGAVGYAYFQMGFGRKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEISSSSTTNTNTNTNNNNNTSSSQVMNHHHQSSYTVNCSNDSNNNNNMASSTACSFSFNPSESQQQHQYFSQSYQNPFFYTQSTSSSSSSKHHDADFPPHDATTHHLFMDSGSYSHDQKDYRHIHGMREDVDERAFFPEASGSARSYLHDSYQHHHQQQQQQQQHLSMGSYKNYSSNSHFQIMNNNNNNDDPRNQEQHCFVLGTDFKSTSKEKDNTEKTTSTTQQRPLHHFFGEWPPKNTDSWLDLASNSRIPS 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01071 381 MobiDBLite consensus disorder prediction 1 21 - -
Arst9g01071 381 Pfam QLQ 17 50 IPR014978 GO:0005524|GO:0005634|GO:0006355
Arst9g01071 381 MobiDBLite consensus disorder prediction 280 322 - -
Arst9g01071 381 SMART QLQ_2 16 52 IPR014978 GO:0005524|GO:0005634|GO:0006355
Arst9g01071 381 PANTHER GROWTH-REGULATING FACTOR 5 13 215 IPR031137 GO:0005634|GO:0006351|GO:0032502
Arst9g01071 381 MobiDBLite consensus disorder prediction 208 238 - -
Arst9g01071 381 MobiDBLite consensus disorder prediction 276 381 - -
Arst9g01071 381 MobiDBLite consensus disorder prediction 112 170 - -
Arst9g01071 381 ProSiteProfiles QLQ domain profile. 17 52 IPR014978 GO:0005524|GO:0005634|GO:0006355
Arst9g01071 381 MobiDBLite consensus disorder prediction 126 170 - -
Arst9g01071 381 ProSiteProfiles WRC domain profile. 85 129 IPR014977 -
Arst9g01071 381 Pfam WRC 86 128 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01071 Arst-Chr9 11870127 11871567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01071 5 361 GRF Transcription Factor Family AT3G13960 41.885 1.42e-71 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Arst9g01071 WRC 2.1e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01071 - - ahf:112710413 673.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g01071 9 11870127 11871567 Arst9g01071 9 11870127 11871567 ECH