Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01054 ATGTTCTCTCGCTTGATTCCTCCCCGAAATCTCTCCGGTTGTCGAGAGCTCCCCACGGTTGGCCCAACAAGTGGTATAAGAGCCGATGGTTTAATCGGTCTGGTGGTCCGGGCGGCGTGTCCCGCGGTGTTTTGCGGCGGTGTGATGGACGAATACTCATATGTGGTGGAGGAGTTAGAGGGGAATGAATCTCATTTACTGCTAAGCAAAAACTCAAAAATCTACCTAGACGCCATCCAAGTAACCCCTGATATCCGTGGCGAAATACGCCATTATTCAGGACGGACATTCCACAATAAACCATTCAGATTATGGAGCAAGAACAAGAAACAAATTGCAAGTTTCACCACCACTTTTGTTCTTAACATCAATCCTCAAACTTCCCCTGGTGGAGAGGGCTTGGCCTTCATCTTAACCGCAAACACCGCTCTCCCGGACAACAGTTCGGGAGAGTGGCTGGGAATTGTGAACGCCACAACTAATGGAACTTCTCAAGCTGGGATTCTTGCTGTGGAATTTGACACAAGAAAAAGTTTTGCAGAAGATGGCCCTGATAACCACGTTGGTATTAACATAAACAGTGTCTATTCCATCAAACAGGAACCATTGTTAATCAAAGGGATTAATATTTCATCAGGTATTAATGTAACTATAAGAATTCAGTATGATAATGATGTTATATCCGTGTTTGGTTCCATGAGTACAAGAACTTCGCCAATGGAGACGCTTTTGGTATCTCCACCACTTAATCTTTCTTCCTATCTTCAGGAAGAGGTTTATGTCGGATTCTCTGCTTCAACGAGTAACTACACTGAGTTGAATTGTGTTAGAGCATGGGAGTTCAACGGTGTAGATATCATTCATGATGATAAGAACCTGTTGTGGATTTGGATAACTGTTGCAACCGTTATTATTATTATTATGATTGGTGGTGTTGTGTTTCTCCTAATTTGGCGAAGGAATCATGGTGTGGGAGCTTCAGGAGATGCATACCCGAGGATAGAGGATCAGATTCAACATTCATCCATGGCTCCAAAGAAGTTCCGGTTAAAGGAAATTAGAAAAGCAACGGGCGGATTCAGCCTTCAAAACAAGCTTGGTGAAGGTGGTTTTGGAACAGTTTATAAAGGGCTACTCGAAAACAAGGAGATAGCTGTAAAGAGTCACTCGAAGGATTCGCGCCAAGGGAAGCAAGAATTCATAGCCGAAGTCACAACAATCGGAAGCCTCCACCACAAGAATTTGGTCAAACTGATTGGTTGGTGCTATGAAAAAGGAGAGCTCCTTCTTATTTATGAGTACATGCCTAATGGAAGCCTAGACAAGTACCTATTCGATAAGAAAAAAAATCTTGGCAATGAATTTGGGGAAGGATTTAACAATTCAACACTAAATTGGGAAACTAGGCAGAGAGTGATATATGGTGTGGCTCAAGCATTGGACTATCTCCACAATGGTTGTGAGAAAAGGGTGCTTCATAGGGACATCAAGGCCAGCAACATAATGTTAGATTCAGAATTCAATGCCAAGTTAGGGGATTTCGGATTGGCGCGAACCATTCAGAAGAGAAATGAAACTCACCATTCCACAAAGGAGATTGCAGGGACGCCAGGGTACATGTCCCCGGAAACATTCCTCATCGGAAGGGCGACGGTGGAAACCGATGTGTACGCGTTCGGCGTTCTTGTGTTGGAAGTAGTGTGCGGAAGAAGGCCAGGGAATGTGAACGGACAGGATGATTACAAGAACAGCATTGTGTATTGGGTTTGGGAGCTTCACGGAGAGGGGAGAATAGTGAGTGCTGTGGACAAAAAGATAAGTAAAGAGATGAAGGATGAAGAAGCTTCTAGAGTTCTTGTTTTGGGGTTGGCTTGTTGCCATCCAAACCCGCACCATAGGCCTTCAATGAGAACTGTTCTGCAAGTTCTGAACGGGGAAGCACAGCCGCCAGTGGTGCCTCAAGAGAGGCCTGCTTTTGTGTGGCCTGCTGTGCCTCCATCTTTCAATAAAGGTGAAGATACTTATTCAGTCCTCAATGGACAAGTCACTCCCATATTCACTGATATCACTGGTAGGTGA 2079 0.4454 MFSRLIPPRNLSGCRELPTVGPTSGIRADGLIGLVVRAACPAVFCGGVMDEYSYVVEELEGNESHLLLSKNSKIYLDAIQVTPDIRGEIRHYSGRTFHNKPFRLWSKNKKQIASFTTTFVLNINPQTSPGGEGLAFILTANTALPDNSSGEWLGIVNATTNGTSQAGILAVEFDTRKSFAEDGPDNHVGININSVYSIKQEPLLIKGINISSGINVTIRIQYDNDVISVFGSMSTRTSPMETLLVSPPLNLSSYLQEEVYVGFSASTSNYTELNCVRAWEFNGVDIIHDDKNLLWIWITVATVIIIIMIGGVVFLLIWRRNHGVGASGDAYPRIEDQIQHSSMAPKKFRLKEIRKATGGFSLQNKLGEGGFGTVYKGLLENKEIAVKSHSKDSRQGKQEFIAEVTTIGSLHHKNLVKLIGWCYEKGELLLIYEYMPNGSLDKYLFDKKKNLGNEFGEGFNNSTLNWETRQRVIYGVAQALDYLHNGCEKRVLHRDIKASNIMLDSEFNAKLGDFGLARTIQKRNETHHSTKEIAGTPGYMSPETFLIGRATVETDVYAFGVLVLEVVCGRRPGNVNGQDDYKNSIVYWVWELHGEGRIVSAVDKKISKEMKDEEASRVLVLGLACCHPNPHHRPSMRTVLQVLNGEAQPPVVPQERPAFVWPAVPPSFNKGEDTYSVLNGQVTPIFTDITGR 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01054 692 Pfam Protein tyrosine and serine/threonine kinase 361 642 IPR001245 GO:0004672|GO:0006468
Arst9g01054 692 SUPERFAMILY Concanavalin A-like lectins/glucanases 50 282 IPR013320 -
Arst9g01054 692 CDD STKc_IRAK 366 645 - -
Arst9g01054 692 Gene3D - 49 292 - -
Arst9g01054 692 SUPERFAMILY Protein kinase-like (PK-like) 341 643 IPR011009 -
Arst9g01054 692 FunFam probable L-type lectin-domain containing receptor kinase S.5 435 649 - -
Arst9g01054 692 Pfam Legume lectin domain 62 284 IPR001220 GO:0030246
Arst9g01054 692 ProSitePatterns Protein kinases ATP-binding region signature. 366 387 IPR017441 GO:0005524
Arst9g01054 692 PANTHER - 83 653 - -
Arst9g01054 692 FunFam Probable L-type lectin-domain containing receptor kinase S.5 345 434 - -
Arst9g01054 692 ProSiteProfiles Protein kinase domain profile. 360 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g01054 692 Gene3D Phosphorylase Kinase; domain 1 345 434 - -
Arst9g01054 692 FunFam Probable L-type lectin-domain containing receptor kinase S.5 50 290 - -
Arst9g01054 692 SMART serkin_6 360 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g01054 692 CDD lectin_legume_LecRK_Arcelin_ConA 61 282 IPR001220 GO:0030246
Arst9g01054 692 ProSitePatterns Serine/Threonine protein kinases active-site signature. 491 503 IPR008271 GO:0004672|GO:0006468
Arst9g01054 692 Gene3D Transferase(Phosphotransferase) domain 1 435 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01054 Arst-Chr9 11438126 11441227 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01054 93 659 Receptor kinase-like Gene Family AT5G55830 37.438 5.24e-124 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Arst9g01054 PK_Tyr_Ser-Thr 1.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01054 - - gmx:100785031 964.14