Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01013 ATGGAGCAAGCTGAATTGGATACCTCAAAACTACCGAGTTTTCCTCCTTACCGCCGATCACACTTACGCAGCGAAACATACCTCACTCTTACTCGAATTTTCTCTCATCTTCCTGCCACACCTGATAATGGCAACGGTAGAAAGAAGCCAGAAAAAAAGGAAAAGGGACCCGGGTTCCCTGAATCTGTTGGTTCTGATTTTATACATCCCAAGAATGCTGTCCCGATTGAAAGCATACAGGAGTTTGACAAGACTGTTGAAGGGACTGGAAACAAGGGCAGGGTGTGTGTTGTCAATGATATTGTTTTGGGTGATATAGAGGAGATGATGGGAATAGAGGAAGTTGAGGATACTTCGAGGACTCTGCTGCAGGACAGGTGTAACGATGCAGATAAAGAGCAACAAAGGATAATGGATGAGTTGGAACTGGTTGTGAATGAAACCCAAAATATCATTTGTGATAGTGGTTTAATCTCTTTGAGTGCTGGGTCAGGTGAGGAACAGAATGGCAGCAATGCAGCTGAGATGCAAGTACAAGGCTCAACGGATTCTCTTCCAAATTCTAAAGAAGCTGAAGTTGAGAAGGTAGAGCTGGATTATGAAGATGAAAGGCTGCTGGATTATGATAATTTGGAAGATAAATGTAAAATGAAAAATGAAAGAAATTTAGAAAAGTCAACTTGTGTAAACAATGCATCAATTTCTTCAAATATTCAGATTGAAAATGAGGACATAGAAGAGGGAGAGCTTGTTGGAGACCTTGGAGTGGATTGTAATTCATTTGACATGCCTACTGCAGATTCCTTTATTCCTCAAACAAACATTGATGAGGTTCAGAACCCCGAAAGTATTAATATGGGGAATACAGAAAAAGAAGGTTTAGGCAAAGAAATAGGTAGTAAACTGGTTACTGACGTGCCAATAAATTATGTTCAAAATCCAGTCTTGCACAAATCCATATTGGAAGAGGACTCTGACCAAGATCATGGAAACCCTGCTGCATCAGAGATGGTTGATGTCAGCTGTAAAAAAAAGCGTGGCCCTGGTTCTGCAGAAAAGAAAGCGAAAAAGAAGAAAAAAGAGCGGAAAAAACGGGCAAAAAAGAACAAACAACTTGGTGTTAAAAGGTTGAAGTTGTCTCTAGTACAACAGAAACCAAAAACCATCTCTTATTGTCGCCATTTTCTTGTTGGAAGATGCTATGAGGGTGACAAGTGCCATTTTTCACATGATACAGTGCCTTCTACCAAATCAAAGCCATGCTCCTTTTTCGCTCGTCACTCCTGCATGAAAGGGGATGACTGCCCTTTTGATCATCAACTCTCCAAGTATCCTTGTGTTAACTTTGTGTCCGGAGGTTTTTGTGTCAGAGGTGATGCATGCTTATTTTCGCACCAGTCACCAGCCAAGGAAGATTTTGCTCCAGCTTCAAGTGTGCACAACCCAGGAATGAAATCTCCACACTTTTCAGGAAACACAAATTCCAACATGCCACCTAACATTCTTGGCTGTAGTTCTATCCAACAAAACCATTTGATCAATCCTCCAAGAGTTCATTCTGATATCAATTCGGAACATAAAGCGACAAACACTGTACAGAAACAGCTTAAGCTTGCATCTAAAGGAGTTAGCTTCGTCGATGTTGCAAAGCTATCGTTGCCTTCTCCTACTACGCCAAAGGAAGGCACGACCAAAGTTGGCTCATCCTCTTCTGACCAACGTACATCTGGAACAAATCAAACCTTGGTTGAAATTCCAAAGAAATTGCCAGCTAGGATTCCAAAGGGAATTAAATTTCTTGCTTTTGGGAAAGATGCTGTGTGCAGTTTTAAGAGTTCTGTCAACTCCCTTGTAATTGGGGAAAATAGTATTGATTTTCTCCAGAATATAAGTTTCAGTTTGCTTGATCATACTAGTTCATCCTTAAAAGATGCAACAAAAGGAAGGGTACCACCGACTGATTTAGTCTCCAGTGAGATTTCTGGTAAAAATCAATCCGTGGCAGAAAGTATAAAATCGAGTTTTCCAGGAAAAGCTTCAATGAATGATGCTTCAACTGGTTTACAAGGTAGCTCTCATGTGGATGACAACGGAAGCAAACCAGTCCAAGAGGCAAGTGGGGCATCTGATTCTTTTCAAATTTCCGCAGCAACACCGTCGCCATTTATGCGTCTGGGTTCTCCTTCATCTTCAGAACAGCTACTATCTAGAAAGGAGCTCTTGTCGACTGTATTGTCATTTGCAGCAGAGCATGAATCAGTTATCAAGATGAAAGATTCTGCTGGCACTTCAACTGCATAA 2301 0.4111 MEQAELDTSKLPSFPPYRRSHLRSETYLTLTRIFSHLPATPDNGNGRKKPEKKEKGPGFPESVGSDFIHPKNAVPIESIQEFDKTVEGTGNKGRVCVVNDIVLGDIEEMMGIEEVEDTSRTLLQDRCNDADKEQQRIMDELELVVNETQNIICDSGLISLSAGSGEEQNGSNAAEMQVQGSTDSLPNSKEAEVEKVELDYEDERLLDYDNLEDKCKMKNERNLEKSTCVNNASISSNIQIENEDIEEGELVGDLGVDCNSFDMPTADSFIPQTNIDEVQNPESINMGNTEKEGLGKEIGSKLVTDVPINYVQNPVLHKSILEEDSDQDHGNPAASEMVDVSCKKKRGPGSAEKKAKKKKKERKKRAKKNKQLGVKRLKLSLVQQKPKTISYCRHFLVGRCYEGDKCHFSHDTVPSTKSKPCSFFARHSCMKGDDCPFDHQLSKYPCVNFVSGGFCVRGDACLFSHQSPAKEDFAPASSVHNPGMKSPHFSGNTNSNMPPNILGCSSIQQNHLINPPRVHSDINSEHKATNTVQKQLKLASKGVSFVDVAKLSLPSPTTPKEGTTKVGSSSSDQRTSGTNQTLVEIPKKLPARIPKGIKFLAFGKDAVCSFKSSVNSLVIGENSIDFLQNISFSLLDHTSSSLKDATKGRVPPTDLVSSEISGKNQSVAESIKSSFPGKASMNDASTGLQGSSHVDDNGSKPVQEASGASDSFQISAATPSPFMRLGSPSSSEQLLSRKELLSTVLSFAAEHESVIKMKDSAGTSTA 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01013 766 Gene3D - 379 443 - -
Arst9g01013 766 MobiDBLite consensus disorder prediction 675 710 - -
Arst9g01013 766 MobiDBLite consensus disorder prediction 163 190 - -
Arst9g01013 766 MobiDBLite consensus disorder prediction 45 59 - -
Arst9g01013 766 MobiDBLite consensus disorder prediction 642 662 - -
Arst9g01013 766 ProSiteProfiles Zinc finger C3H1-type profile. 386 413 IPR000571 GO:0046872
Arst9g01013 766 MobiDBLite consensus disorder prediction 163 187 - -
Arst9g01013 766 Pfam CCCH-type zinc finger 392 411 IPR041367 -
Arst9g01013 766 SUPERFAMILY CCCH zinc finger 386 411 IPR036855 GO:0046872
Arst9g01013 766 ProSiteProfiles Zinc finger C3H1-type profile. 445 468 IPR000571 GO:0046872
Arst9g01013 766 SUPERFAMILY CCCH zinc finger 444 467 IPR036855 GO:0046872
Arst9g01013 766 Coils Coil 350 370 - -
Arst9g01013 766 MobiDBLite consensus disorder prediction 556 581 - -
Arst9g01013 766 SMART c3hfinal6 387 412 IPR000571 GO:0046872
Arst9g01013 766 SMART c3hfinal6 415 441 IPR000571 GO:0046872
Arst9g01013 766 SMART c3hfinal6 443 467 IPR000571 GO:0046872
Arst9g01013 766 MobiDBLite consensus disorder prediction 349 370 - -
Arst9g01013 766 MobiDBLite consensus disorder prediction 323 370 - -
Arst9g01013 766 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI 41 763 IPR045124 GO:0003723|GO:0045892
Arst9g01013 766 ProSiteProfiles Zinc finger C3H1-type profile. 415 442 IPR000571 GO:0046872
Arst9g01013 766 MobiDBLite consensus disorder prediction 36 67 - -
Arst9g01013 766 MobiDBLite consensus disorder prediction 554 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01013 Arst-Chr9 10779142 10787836 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Arst9g01013 zf-CCCH_4 2.9e-06 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01013 - - adu:107464618 1476.46