Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01012 ATGGCTGTCCCAAAAGTGAATGAAATGTTGCTTCAAGACCTTGAAGAAATGGGATTTCCACGGTCACAAGCCACCCGGGCACTTTATTATTCAGGCAACAAGAACTTAGAGGATGCAATACATTGGACAATTGATCACGAAAATGACCCTGATATTGATGTGATGCCACTGGTAGATGTAGACATTGATATTGATTCTCCTCAATCCTTCCCTATCACGGAAGAAATCAGAATCAAAGCTCAGAAGCTAAGGGAACAAGAGCATAAGAAAAAAGAGGAGGAACAAAAAAGATTGGAGAGAGAACGGGAGAAGGAGAGGATTGAAGCAGGTAAGAGACTCCTTGAGGCAAAGCGAATTGCTGAAGAAAATGCAAGACAAAGGAATTTAGCCTTGAGAAAAGCAGAAAAGGAAGAAGAGAAAAAGGCAAGGGAAAATGTTCTCCAAAAACTACAACAGGACAAGATAAATAGAAGATCTAAGCATGAATCAATATTGCCTATAGATGGCCTAGCCAATGTCAGATCATCTGCTACTACCATCGAACAGCAAGATAAGATATTTCAGAATCCAAAACCTGTTTCCACAATTGAAAAGGTTGATTACTTAAGGGAATGTTTGAGGTCTCTCAAGCGTAAACACCAGGCCGAGCATGGGAGAGTCAGAAAGGCCTTCGAAACACTTTCAATTTATGTTGGAAATGTTGTCAAGAATCCAAACGAGGAAAAGTACAGGAAGATCAGACTAAGCAATCCGTTATTCCAAGAAAGAGTTGCAAGTTTGAATGGAGGTGTGGAGTTTCTTGAACTCTGTGGTTTTGAAAGAACCGGTGACTTCTTGTATCTACCTCATGAAAAGTGTGATATAGCATTACTAAATTCAGCTGGTGCTGTGATGAATTCTGCAATCACAAATCCTTTCTTTGGACTTCTAAGTACTTAG 939 0.3994 MAVPKVNEMLLQDLEEMGFPRSQATRALYYSGNKNLEDAIHWTIDHENDPDIDVMPLVDVDIDIDSPQSFPITEEIRIKAQKLREQEHKKKEEEQKRLEREREKERIEAGKRLLEAKRIAEENARQRNLALRKAEKEEEKKARENVLQKLQQDKINRRSKHESILPIDGLANVRSSATTIEQQDKIFQNPKPVSTIEKVDYLRECLRSLKRKHQAEHGRVRKAFETLSIYVGNVVKNPNEEKYRKIRLSNPLFQERVASLNGGVEFLELCGFERTGDFLYLPHEKCDIALLNSAGAVMNSAITNPFFGLLST 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01012 312 SUPERFAMILY PUG domain-like 203 306 IPR036339 -
Arst9g01012 312 Coils Coil 73 108 - -
Arst9g01012 312 Gene3D - 203 300 - -
Arst9g01012 312 PANTHER F13M7.16 PROTEIN 1 310 - -
Arst9g01012 312 Pfam UBA/TS-N domain 11 42 IPR015940 -
Arst9g01012 312 MobiDBLite consensus disorder prediction 84 104 - -
Arst9g01012 312 SMART PGNneu 222 283 - -
Arst9g01012 312 Coils Coil 117 153 - -
Arst9g01012 312 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 5 46 IPR015940 -
Arst9g01012 312 Gene3D - 8 52 - -
Arst9g01012 312 SUPERFAMILY UBA-like 5 55 IPR009060 GO:0005515
Arst9g01012 312 CDD UBA_PUB_plant 6 53 - -
Arst9g01012 312 Pfam PUB domain 220 287 IPR018997 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01012 Arst-Chr9 10745491 10752758 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01012 1 310 C2H2 Transcription Factor Family AT1G04850 53.674 2.87e-88 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01012 - K24348 gmx:100781260 400.208