Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01010 ATGTTGCTTCAAGACCTTGAAGAAATGGGATTTCCACGGTCACAAGCCACCCGGGCACTTTATTATTCAGGCAACAAGAACTTAGAGGATGCAATACATTGGACAATTGATCACGAAAATGACCCTGATATTGATGTGATGCCACTGGTAGATGTAGACATTGATATTGATTCTCCTCAATCCTTCCCTATCACGGAAGAAATCAGAATCAAAGCTCAGAAGCTAAGGGAACAAGAGCATAAGAAAAAAGAGGAGGAACAAAAAAGATTGGAGAGAGAACGGGAGAAGGAGAGGATTGAAGCAGGTAAGAGACTCCTTGAGGCAAAGCGAATTGCTGAAGAAAATGCAAGACAAAGGAATTTAGCCTTGAGAAAAGCAGAAAAGGAAGAAGAGAAAAAGGCAAGGGAAAATGTTCTCCAAAAACTACAACAGGACAAGATAAATAGAAGATCTAAGCATGAATCAATATTGCCTATAGATGGCCTAGCCAATGTCAGATCATCTGCTACTACCATCGAACAGCAAGATAAGATATTTCAGAATCCAAAACCTGTTTCCACAATTGAAAAGGTTGATTACTTAAGGGAATGTTTGAGGTCTCTCAAGCGTAAACACCAGGCCGAGCATGGGAGAGTCAGAAAGGCCTTCGAAACACTTTCAATTTATGTTGGAAATGTTGTCAAGAATCCAAACGAGGAAAAGTACAGGAAGATCAGACTAAGCAATCCGTTATTCCAAGAAAGAGTTGCAAGTTTGAATGGAGGTGTGGAGTTTCTTGAACTCTGTGGTTTTGAAAGAACCGGTGACTTCTTGTATCTACCTCATGAAAAGTGTGATATAGCATTACTAAATTCAGCTGGTGCTGTGATGAATTCTGCAATCACAAATCCTTTCTTTGGACTTCTAAGTACTTAG 915 0.3989 MLLQDLEEMGFPRSQATRALYYSGNKNLEDAIHWTIDHENDPDIDVMPLVDVDIDIDSPQSFPITEEIRIKAQKLREQEHKKKEEEQKRLEREREKERIEAGKRLLEAKRIAEENARQRNLALRKAEKEEEKKARENVLQKLQQDKINRRSKHESILPIDGLANVRSSATTIEQQDKIFQNPKPVSTIEKVDYLRECLRSLKRKHQAEHGRVRKAFETLSIYVGNVVKNPNEEKYRKIRLSNPLFQERVASLNGGVEFLELCGFERTGDFLYLPHEKCDIALLNSAGAVMNSAITNPFFGLLST 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01010 304 Coils Coil 109 145 - -
Arst9g01010 304 Gene3D - 1 44 - -
Arst9g01010 304 SMART PGNneu 214 275 - -
Arst9g01010 304 Coils Coil 65 100 - -
Arst9g01010 304 Gene3D - 195 292 - -
Arst9g01010 304 PANTHER F13M7.16 PROTEIN 2 302 - -
Arst9g01010 304 Pfam UBA/TS-N domain 3 34 IPR015940 -
Arst9g01010 304 SUPERFAMILY UBA-like 3 47 IPR009060 GO:0005515
Arst9g01010 304 SUPERFAMILY PUG domain-like 195 298 IPR036339 -
Arst9g01010 304 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 1 38 IPR015940 -
Arst9g01010 304 MobiDBLite consensus disorder prediction 76 96 - -
Arst9g01010 304 Pfam PUB domain 212 279 IPR018997 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01010 Arst-Chr9 10745490 10752758 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01010 2 302 C2H2 Transcription Factor Family AT1G04850 53.947 1.22e-85 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01010 - K24348 gmx:100781260 386.726