Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01003 ATGTCGAGTAACAATCTCTACGGCCGAATACCAATGGAGATTGGCACTCTTAAGAAGCTTGAAAAGTTGAGTCTTAACAAGAATAACTACTCTGGAGAAATTCCATCTTCCATATGGAATATCTCTTCTCTAAGTATTCTTTCTATGGGTTATAATTACTTGGAAGGCAAGATACCTGAAGAAATTGGAAAATTAAAAAGCTTATCAGGTTTCGCCATTGGTGCCAATAAACTGTCCGGGGAGCTTCCTTCTTCGCTTTACAATCTGTCCTCGCTCGCTATTTTCTTTGCTGCAGAAAACCAGTTTCATGGCTCCCTTCCATCTGACATGTTCTCCAACCTCATCAGTCTGCAAGAGATTGGCATTGGAGGGAATCAAATTTCAGGTCCAATCCCAACTTCCATTTCAAATGCATCCTCACTTCAACTTTTTGATATTGGCTATTGCAGTTTTGTTGGAAAAGTTTCAAATCTAGGAAACCTGAAGGATCTTTATTGGCTAAATTTAAACTACAACCATCTTGGTAGTAATTCAGCTCTAGACTTGGATTTTATAACATCTTTGGTTAATTGTACCGAATTGGAAAGTTTGGTTTTGAGTTCGAACAATTTCGGAGGTGTTTTACCCAACTCCATAGGGAATTTGTCAGCTCAACTCACTGAAATAAGTCTTGATTTTAATCAAATACATGGAACTATCCCTGAAACTATATGCAATAACACAAATTTAATTGATTTGGATTTGGAATACAACCACTTTACTGGGTTTATTCCAAATTCTTTTGGAAAGTTTCAGAAAATGCAATTATTGGGTTTGAGTGCAAACAACCTTATGGGTGAGATACCTATCTCTTTGGGTAACCTCACTCAACTGGTTGAAATAAGCATTTCAAAAAATATGTTTTATGGGAAAATTCCACCAAGTATTGGAAATTGGCAAAACTTGTTGTACTTGGATTTTTCAGGAAACAATTTTAGTGGTGCTATACCAGTGGAAGTTTTTAGCCTTTCATCCTTGTCCACAAATCTGAACTTATCTCATAATTCACTGAATGGCACTCTTCCTGTTGAGGTTGGAGCTCTTGGAAACCTTGGAACTTTGGATATCTCCAATAACTCTCTATCTGGGCAGATTCCTATGACTATTGGAAAGTGCACACGTATGGAATATTTAGACTTACATGGTAATTCTTTCAGTGGCATGATACCTTCATCAATAGCTTCATTGAAAGGCCTTTCTCATTTGGATCTCTCGCGAAATAACTTGTCCGGATCAATTCCAACAGATATGCAGAGGCTTTCTTTTCTAACATATTTGAATGTATCTTTCAATATGCTAGAAGGGAAGGTACCATTGGAGGGTGTATTCAAGGATGCAACTGCAATTTCAATTGTTGGTAATAATAAGCTTTGTGGAGGTGTCTTACAGTTACATCTTGCACCATGCCCTGCCAATGTTATGGCAAGAAGCAATCACCATAATTTGAAGCTAGGCATAATTGTTATTTGTGTGGTTGTATGCCTTATTTTGCTTTCAATTGTTGTTTTCTTGAGCAAGAAGAAAAAAAGAACATCATCTTTGACAGCATCAACAAATCAGTTATCAATGGTGTCATACCAAATCCTACATCATTCAACACAGGGGTTTTCTACCAGTAACTTGATTGGATCTGGTAGCTTTGGTTCCGTGTACAAAGGATTCCTTGAATCCGAACACAAGTTTGTCGCCATAAAGGTGATAAACCTTCAAATGAGTGGAGCTCACAAGAGTTTCATTGCTGAATGTAATGCTCTAAAATTTATCAGGCATCGAAATCTGGTGAAGATTTTAACATGTTGCTCGAGCATAGATTATAGTGGCCAAGAATTTAAAGCATTAGTGTTTGAGTACATGCCTAATGGAAGCTTAGAAAAGTGGTTGCATCCTAGTGCTGAAATCACAGATAGGCTATATACATTAGACCTTACTCAAAGACTAAATATTGTTGTTGATGTGGCTTCTGCATTACATTATCTTCACTATGGATGTGAACAACCTGTTGTTCATTGTGATCTAAAGCCAGAGAATGTGCTTCTTGATGATGACATGGTTGCTCATGTGACTGATTTTGGATTAGCAAGGCTTCTCTCAGTGACTAATGGTGATCCTCATAACCAATCTAGCACAACTGTGTTCAAGGGAACTATTGGATATGCTCCTCCAGAGTATGGAATGAGTTGTGAGGTGTCGATGCAAGGTGATGTGTATTCTTTTGGAATTCTAGTATTGGAAATGGTAACTGGAAGGAGGCCAATGGAAGAAATGTTTAAAGATGATAACAATCTTCATAACTATGTGAAGATGGCATACTCACACAATCTTCTAGAGATTATGGACTCAACTCTTTTGCCAAAACAAACAGGAAAAGAAGAAAAATACACAAAGAAGCTAACCATGTGTGTATTTTCTCTAATTAGAATTGGACTTGCTTGTTCAGTTGAATCCCCGAATGAAAGAATGAACATGGCAGATGTCACTAGGGAGCTAAACCTTACCAAAGATGTGTTTCTTCAAGATTGA 2559 0.374 MSSNNLYGRIPMEIGTLKKLEKLSLNKNNYSGEIPSSIWNISSLSILSMGYNYLEGKIPEEIGKLKSLSGFAIGANKLSGELPSSLYNLSSLAIFFAAENQFHGSLPSDMFSNLISLQEIGIGGNQISGPIPTSISNASSLQLFDIGYCSFVGKVSNLGNLKDLYWLNLNYNHLGSNSALDLDFITSLVNCTELESLVLSSNNFGGVLPNSIGNLSAQLTEISLDFNQIHGTIPETICNNTNLIDLDLEYNHFTGFIPNSFGKFQKMQLLGLSANNLMGEIPISLGNLTQLVEISISKNMFYGKIPPSIGNWQNLLYLDFSGNNFSGAIPVEVFSLSSLSTNLNLSHNSLNGTLPVEVGALGNLGTLDISNNSLSGQIPMTIGKCTRMEYLDLHGNSFSGMIPSSIASLKGLSHLDLSRNNLSGSIPTDMQRLSFLTYLNVSFNMLEGKVPLEGVFKDATAISIVGNNKLCGGVLQLHLAPCPANVMARSNHHNLKLGIIVICVVVCLILLSIVVFLSKKKKRTSSLTASTNQLSMVSYQILHHSTQGFSTSNLIGSGSFGSVYKGFLESEHKFVAIKVINLQMSGAHKSFIAECNALKFIRHRNLVKILTCCSSIDYSGQEFKALVFEYMPNGSLEKWLHPSAEITDRLYTLDLTQRLNIVVDVASALHYLHYGCEQPVVHCDLKPENVLLDDDMVAHVTDFGLARLLSVTNGDPHNQSSTTVFKGTIGYAPPEYGMSCEVSMQGDVYSFGILVLEMVTGRRPMEEMFKDDNNLHNYVKMAYSHNLLEIMDSTLLPKQTGKEEKYTKKLTMCVFSLIRIGLACSVESPNERMNMADVTRELNLTKDVFLQD 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01003 852 Pfam Leucine rich repeat 218 277 IPR001611 GO:0005515
Arst9g01003 852 Pfam Leucine rich repeat 387 446 IPR001611 GO:0005515
Arst9g01003 852 SUPERFAMILY L domain-like 218 472 - -
Arst9g01003 852 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 1 188 - -
Arst9g01003 852 PANTHER OS04G0122200 PROTEIN 2 126 - -
Arst9g01003 852 SUPERFAMILY Protein kinase-like (PK-like) 523 843 IPR011009 -
Arst9g01003 852 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 631 852 - -
Arst9g01003 852 SUPERFAMILY RNI-like 2 277 - -
Arst9g01003 852 ProSiteProfiles Protein kinase domain profile. 549 850 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g01003 852 Gene3D Transferase(Phosphotransferase) domain 1 631 849 - -
Arst9g01003 852 Pfam Protein kinase domain 551 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g01003 852 ProSitePatterns Protein kinases ATP-binding region signature. 555 578 IPR017441 GO:0005524
Arst9g01003 852 ProSitePatterns Serine/Threonine protein kinases active-site signature. 680 692 IPR008271 GO:0004672|GO:0006468
Arst9g01003 852 SMART serkin_6 549 850 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g01003 852 CDD STKc_IRAK 555 843 - -
Arst9g01003 852 Gene3D Phosphorylase Kinase; domain 1 512 630 - -
Arst9g01003 852 FunFam Inactive leucine-rich repeat receptor-like protein kinase 189 482 - -
Arst9g01003 852 FunFam LRR receptor-like serine/threonine-protein kinase EFR 519 630 - -
Arst9g01003 852 Gene3D Ribonuclease Inhibitor 180 481 IPR032675 -
Arst9g01003 852 Gene3D Ribonuclease Inhibitor 1 179 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01003 Arst-Chr9 10671435 10674751 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01003 1 851 Receptor kinase-like Gene Family AT3G47570 45.434 0.0 706
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Arst9g01003 Pkinase 4.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01003 - - ahf:112708871 1230.7