Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00989 ATGCTAGAGAGATTGAAAGTTGACGAATGCAAGTTGTATTTGCGAAAGAATTGTCTTAGGCTATCTGGAAATAAGGATGTACTCGTCCAGCGTATTAAGGAGCATCTGCAGATCATAAATGGTGGAGGCGAAAGAAAGTACCCACGCTCTAGCTTTGTGTTGGACTGTAAAGGTGATGCATGCACTGGGGATGTTGTTTTGTTTGAGCAGAATGTTTATGAAATGTTCAACATAGCATCTAGAAGTGCCAGCGGTCCATCATGTGGTAAAAGGACTGTTGCAGGTCGCATAGTGAAAGAAAGCTATGGCACTGCCAAGCAGCAGCATACTTTTACGATTGAAGTACTCTGGAGCAAAGGAGAAAAGCCTTTTCCTCCGCTTCATCCCCTATTGATTAAGGGTCGAAACCTTTATAGGTTGAAGACTTTGAGACAGAAATGGGAGGATGAAGGGGAAAGGCAGAAAATATTGACGGAGAAACACTCGAGGGGATCTATTGCTCGGGCAGATAGAGAAGCAAGGGTACAAGAAAAAGTGAACAGACAAGCAATTGTGGAAAACAGGGTCTCCAGAAAGCATTCAGTAATACATCATCCTCATGCCATTAATCAAGAAAAACCAGCATTCCCATCTAAGAGTTCAGCTGTATCTGCCATTAATCAAGAAAAACCACCATTCCCATCAGCAGTGACCGAACAGTGGAGTAAGTCTGCTAGTTCTAGACGATCGAATGAATCGACATCATTTGGTGTTAACCATGTAAATAACCAGCAAGATTGGAAGCACTCATCTGACCCAATCATTAAAGCTCAACTTGGTGACCTCCACTCCAAAGAAAAAGGGCAATACCAATACCATCCTAGTGAGAGAAACAGGTTTGCACACAGAAATCCTTTGACTAGTGCTAATCACCTTCTTCCGTTGCTGAACAACAGAGAAATCCACAAGCAAAAGCAGCTATGTAGATATTATGCTGGTGGGGGGTGCTATTTTGGGGACAATTGCAAATTTGTACATGATTTGATACTATCAAATCAAGAACAAAGTCTTATCCAGTAG 1059 0.4212 MLERLKVDECKLYLRKNCLRLSGNKDVLVQRIKEHLQIINGGGERKYPRSSFVLDCKGDACTGDVVLFEQNVYEMFNIASRSASGPSCGKRTVAGRIVKESYGTAKQQHTFTIEVLWSKGEKPFPPLHPLLIKGRNLYRLKTLRQKWEDEGERQKILTEKHSRGSIARADREARVQEKVNRQAIVENRVSRKHSVIHHPHAINQEKPAFPSKSSAVSAINQEKPPFPSAVTEQWSKSASSRRSNESTSFGVNHVNNQQDWKHSSDPIIKAQLGDLHSKEKGQYQYHPSERNRFAHRNPLTSANHLLPLLNNREIHKQKQLCRYYAGGGCYFGDNCKFVHDLILSNQEQSLIQ 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00989 352 MobiDBLite consensus disorder prediction 199 264 - -
Arst9g00989 352 ProSiteProfiles Zinc finger C3H1-type profile. 316 342 IPR000571 GO:0046872
Arst9g00989 352 Gene3D - 271 349 - -
Arst9g00989 352 SUPERFAMILY CCCH zinc finger 315 340 IPR036855 GO:0046872
Arst9g00989 352 SMART c3hfinal6 316 341 IPR000571 GO:0046872
Arst9g00989 352 Pfam SAP domain 2 36 IPR003034 -
Arst9g00989 352 Pfam CCCH-type zinc finger 320 340 IPR041367 -
Arst9g00989 352 PANTHER SAP DOMAIN-CONTAINING PROTEIN 2 292 - -
Arst9g00989 352 MobiDBLite consensus disorder prediction 207 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00989 Arst-Chr9 10491499 10494959 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Arst9g00989 SAP 5.6e-07 CL0306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00989 - - adu:107464672 713.761