Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00958 ATGCTTCTAGACAAGAATGTCATTCATGAAACGCATTATGAGGTTCTCAACGTCAAGGAAGATTCAAGTTATGAAGAAATCCGTGCTAGTTACTGCTCTGCCATACTCAGTATACATGCTGATAAGCTGTTGAAATCTTCTGATGCATCCGGCAGCAATCAAACTAGTGGAGATAGATTTCTCAAAGTACAAAAGGCGTGGAAAGTTCTTGGCGATTCAAGCTCTTGTTTATTTTATGATAATGAGCTTTGAAGTTCAAGTTCAAGGCGTGATGTCTAGGCTGTTGATGTTGCAGAAGATTTAAGCTTAGAGGATATGATGGGTGAAGATGACCGAGAAGCATTGGAACTGTTTTATCAGTGCAGATGTGGAGATTATTTCTCTATAGACTCATTGGAATTGCATAAAATGGGGTATTCCTTATTGAGGGATGAAAGTAGAATATCTATATTGAACAATGATTCTTTGCTAGGATTACTTATTCTTCCCTGCGGATCATGTTCTCTAAAAGCTCGTCTGGTAATCAATATGGATGGACATTGA 543 0.3812 MLLDKNVIHETHYEVLNVKEDSSYEEIRASYCSAILSIHADKLLKSSDASGSNQTSGDRFLKVQKAWKVLGDSSSCLFYDNELXSSSSRRDVXAVDVAEDLSLEDMMGEDDREALELFYQCRCGDYFSIDSLELHKMGYSLLRDESRISILNNDSLLGLLILPCGSCSLKARLVINMDGH 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00958 180 FunFam DNAJ heat shock N-terminal domain-containing protein-like 91 179 - -
Arst9g00958 180 SUPERFAMILY CSL zinc finger 98 178 IPR036671 -
Arst9g00958 180 ProSiteProfiles DPH-type metal-binding (MB) domain profile. 97 176 IPR007872 -
Arst9g00958 180 SUPERFAMILY Chaperone J-domain 10 83 IPR036869 -
Arst9g00958 180 PRINTS DnaJ domain signature 13 31 IPR001623 -
Arst9g00958 180 PRINTS DnaJ domain signature 55 75 IPR001623 -
Arst9g00958 180 Pfam DnaJ domain 11 80 IPR001623 -
Arst9g00958 180 Pfam CSL zinc finger 100 174 IPR007872 -
Arst9g00958 180 ProSiteProfiles dnaJ domain profile. 11 83 IPR001623 -
Arst9g00958 180 Gene3D DPH Zinc finger 89 180 IPR036671 -
Arst9g00958 180 SMART dnaj_3 10 75 IPR001623 -
Arst9g00958 180 Gene3D DnaJ domain 2 88 IPR036869 -
Arst9g00958 180 PANTHER DPH3 HOMOLOG-RELATED 11 177 IPR044248 GO:0017183|GO:0046872
Arst9g00958 180 CDD DnaJ 11 72 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00958 Arst-Chr9 10185644 10186294 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00958 12 80 C2H2 Transcription Factor Family AT1G74250 39.130 9.91e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00958 K17867 - gmx:100814856 242.662