Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00922 ATGGATCCACCACTTTGTGTCAATGGTTGCGGCTTCTATGGTTCTGCTGCCAACAACAATCTTTGCTCGAAGTGTTACAAAGATCACATCAAAGAAACCTTCATCATCGAGGAATCACAAAGCAATAATAATAATGGAACATTATTATTAGATGATACCAAATCTAATGATAAACCACCATTAGCTGATGTGTTTCAAAGATTTACCAAAGACCTTGGTGCAACGGTTGATGATATTTCTAACAATAACAAGAAGAATGAGACGAAGAAAAGGTGCAAGACGTGCAATAAAAGAGTTGGATTAACAGGATTTGAGTGTCGATGTGGAGATTTATTTTGTGGAAAGCATAGGTATCCAGAAGTTCATGAATGTAAATTCAATTTTAAGGATATTGGTCGCAATATTTTAGCAAAGCAGAATCCTCTTTGTATTGGTGATAAGTTAGATGAAAGAATTTAG 459 0.3508 MDPPLCVNGCGFYGSAANNNLCSKCYKDHIKETFIIEESQSNNNNGTLLLDDTKSNDKPPLADVFQRFTKDLGATVDDISNNNKKNETKKRCKTCNKRVGLTGFECRCGDLFCGKHRYPEVHECKFNFKDIGRNILAKQNPLCIGDKLDERI 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00922 152 Gene3D - 1 48 - -
Arst9g00922 152 ProSiteProfiles Zinc finger A20-type profile. 1 34 IPR002653 GO:0003677|GO:0008270
Arst9g00922 152 SMART A20_3 3 27 IPR002653 GO:0003677|GO:0008270
Arst9g00922 152 SUPERFAMILY AN1-like Zinc finger 80 146 IPR035896 -
Arst9g00922 152 Pfam A20-like zinc finger 5 27 IPR002653 GO:0003677|GO:0008270
Arst9g00922 152 Pfam AN1-like Zinc finger 92 127 IPR000058 GO:0008270
Arst9g00922 152 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 33 - -
Arst9g00922 152 Gene3D - 72 145 IPR035896 -
Arst9g00922 152 PANTHER AN1-TYPE ZINC FINGER PROTEIN 2 149 - -
Arst9g00922 152 FunFam Zinc finger AN1-type containing 6 68 147 - -
Arst9g00922 152 SMART AN1_Zf_4 92 129 IPR000058 GO:0008270
Arst9g00922 152 ProSiteProfiles Zinc finger AN1-type profile. 86 132 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00922 Arst-Chr9 9658907 9659365 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00922 5 150 C2H2 Transcription Factor Family AT3G52800 38.710 3.03e-29 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00922 - - aip:107621478 171.014