Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00909 ATGGAAGCTAATAGCGATCTTAAGATTCCTCTGTTGCAGACTTCACCAGAAGATGCCGCAGTAAGGACGGTTATGTTTCAAATAGGTGACATCAAGTGTGCATCGTGTGTAAATTCTGTTGAATCTGCAATTAAGGACCTCCATGGAGTAAACAGCATCATGGTGTCGCCACTTGACGGCCGAGCTATAATAAAATATTCTCCAAAATTTATCACTGCGAAAAACATAAAAGAAGCAATAGAAGACAGTGGCTTTGGAGTTGATGAGCTACAGGAGCAAGAAATATCGGTATGCCGAGTAAGGATTAAAGGGATGGCCTGCACAAGCTGCTCCGAGTCTGTTGAGAATGCACTTCGGATGATTGATGGAGTGAAAAAGGCAACTGTAGGTCTAGCTTTAGAGGAGGCCAAAGTGTACTTTGATCCTAACCTCGCCGATGCAAACAAGATAATTGAAGCTATAGAAGATGCTGGTTTCGGAGCAGAACTTATTAGCTCTGCTAATGATGTGAACAAAGTGCATTTAAAACTAGAAGGGGTTGATTCTCTTGAAGATGTAAATATTGTGATGTCTTCGCTTGAGTTCGCAGCAGGTGTGAATCATGTTGAATTCAATTTGACAGAACATATAGTAACAGTTAACTATGAACCGGATATTACGGGTCCAAGATCTCTCATTCACTTTATTCAGACAGCTAGCTCTGGCACCAAGATGTACCAGGCATCCTTGCACACTACTTCAGGAAAAAGAGAAAGGGATAAGGTGGATGAAATTCGTAGGTATAGGGACCAATTTTTGTTCAGCTGCTTATTTTCGGTTCCTGTGTTTGTATTTGCCATGGTGCTTCCCATGCTTCCTCCCTATGGAAACTGGTTGAACTATAAGATCCACCATATGCTAACCCTTGGGCTGTTTCTGAGATGGATTCTTAGTACACCGGTGCAGTTCATAGTTGGCAAAAGGTTTTATGTAGGATCATATCATGCACTGAGGCGAAGATCTGCTAACATGGATGTGCTGGTTGCATTAGGAACTAATGCTGCTTATTTTTACTCCGTATACATTTTAATAAAAGCACTGACTTCAGATACTTTTCAAGGACAAGATTTCTTTGAGACCAGTTCCATGTTGATATCCTTTATTCTGTTAGGGAAATATTTGGAGAATTTGGCTAAAGGGAAAACCTCAGATGCTTTAGGAAAGCTGACACAACTTGTTCCTGATAAAGCTTATCTGGTGGACATGGATGCTGATGAAAATGTTATCTCAGAGACAGAAATTGACACTCAACTAATACAAAAGGGTGACATACTTAAGATTGTTCCTGGGGCCAAAATTCCTATTGATGGTGTTGTTATAAAAGGGCAAAGCTATGTAAATGAAAGTATGATTACCGGGGAGGCAAAACCTGTTGATAAAAGTCCTGGTGACAAGGTTATTGGTGGAACAATCAATGAGAATGGCTGCTTACTGATTAAGGCTACACATGTTGGATCAGATACTGCACTTTCTCAAATTGTTCAGCTTGTAGAAACCGCTCAACTAGCTAAGGCACCAGTTCAAAAACTCGCAGACCACATTTCAAGGGTTTTTGTTCCATTAGTGGTTGTTGCAGCATTTTTAACTTGGATGGGATGGTTTGTTCCTGGGGAAGTTGGTTTATACCCTAGGCATTGGATACCAAAAGCAATGAATGCATTTGAACTTGCTCTGCAATTTGCTATTTCTGTACTAGTTGTTGCTTGCCCTTGTGCTTTGGGTCTAGCAACACCAACTGCAGTCATGGTTGCTTCAGGCATGGGTGCTTCTCAAGGTGTTCTCATCAAGGGTGGAGATGCATTGGAAAAGGCACACAAGGTAAAAGTTGTTGTGTTTGATAAGACCGGGACACTAACCGTTGGAAAGCCGGCGGTAGTTAGTGCAGTACTGTTTTCTGATTTTACTATGGAAGAATTTTATGACATGACAATAGCAGTGGAGTCAAGTAGTGAGCACCCACTAGCAAAAGCTGTTGTTAAACATGCAAAGAAGCTGCGCAAGAAATTTGGTTCCAACGATGAGGAAGTGCCAGATGTGAAGGACTTTGAGGTGCAAGTGGGAGCTGGTGTGAGTGGAAAAGTTGGTGAAAGAACAGTTCTAGTTGGAAACAAGAGACTTATGCATGCTTGTAATGTTCCACTGAGTTCCGAGGTTGAGAGGTACATGTCTGAGAATGAAATTCTAGCGAGAACTTGTGTTCTGGTTTCGATCGACGGGAAGATTGCTGGAGCATACTCTGTAACTGATCCATTAAAGCCCGAAGCTAAGCGTGTCATATCTTTTCTCCACTCCATGGGCATTTCAAGCATCATAGCAACCGGTGATAACCTTGCTACTGCAACTGCTATTGCAAACGAAGTTGGTATTGATGAGGTCTTCGCCGAGACAGATCCACTAGGGAAAGCTGATAAGGTGAAAGAGTTACAGATGAAAGGGATGACTGTGGCAATGGTGGGTGATGGAATAAATGACTCGCCGGCCTTGGTTGCTGCTGATGTTGGTATGGCAATAGGTGCTGGAACTGATGTAGCCATAGAAGCAGCTGATATAGTGCTTGTGAAAAACAGCTTGGAAGATGTGATCACAGCCATAGATCTTTCCAGAAAGACCATGTCGCGTATCCGCCTCAATTATATCTGGGCTCTCGGCTATAACATTCTAGGCATGCCGGTTGCTGCCGGTGTCTTATATCCCTTTACCGGAATCAGATTGCCCCCATGGCTGGCCGGTGCTTGCATGGCTGCTTCTTCTATTAGCGTGGTTTCTTCATCTCTTCTACTGCAATTGTATAAAAAACCTTTAAATGTTCAATGCATCTGA 2859 0.425 MEANSDLKIPLLQTSPEDAAVRTVMFQIGDIKCASCVNSVESAIKDLHGVNSIMVSPLDGRAIIKYSPKFITAKNIKEAIEDSGFGVDELQEQEISVCRVRIKGMACTSCSESVENALRMIDGVKKATVGLALEEAKVYFDPNLADANKIIEAIEDAGFGAELISSANDVNKVHLKLEGVDSLEDVNIVMSSLEFAAGVNHVEFNLTEHIVTVNYEPDITGPRSLIHFIQTASSGTKMYQASLHTTSGKRERDKVDEIRRYRDQFLFSCLFSVPVFVFAMVLPMLPPYGNWLNYKIHHMLTLGLFLRWILSTPVQFIVGKRFYVGSYHALRRRSANMDVLVALGTNAAYFYSVYILIKALTSDTFQGQDFFETSSMLISFILLGKYLENLAKGKTSDALGKLTQLVPDKAYLVDMDADENVISETEIDTQLIQKGDILKIVPGAKIPIDGVVIKGQSYVNESMITGEAKPVDKSPGDKVIGGTINENGCLLIKATHVGSDTALSQIVQLVETAQLAKAPVQKLADHISRVFVPLVVVAAFLTWMGWFVPGEVGLYPRHWIPKAMNAFELALQFAISVLVVACPCALGLATPTAVMVASGMGASQGVLIKGGDALEKAHKVKVVVFDKTGTLTVGKPAVVSAVLFSDFTMEEFYDMTIAVESSSEHPLAKAVVKHAKKLRKKFGSNDEEVPDVKDFEVQVGAGVSGKVGERTVLVGNKRLMHACNVPLSSEVERYMSENEILARTCVLVSIDGKIAGAYSVTDPLKPEAKRVISFLHSMGISSIIATGDNLATATAIANEVGIDEVFAETDPLGKADKVKELQMKGMTVAMVGDGINDSPALVAADVGMAIGAGTDVAIEAADIVLVKNSLEDVITAIDLSRKTMSRIRLNYIWALGYNILGMPVAAGVLYPFTGIRLPPWLAGACMAASSISVVSSSLLLQLYKKPLNVQCI 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00909 952 NCBIfam copper ion binding protein 25 87 IPR006122 GO:0005507
Arst9g00909 952 NCBIfam copper ion binding protein 100 160 IPR006122 GO:0005507
Arst9g00909 952 Gene3D - 392 514 - -
Arst9g00909 952 SUPERFAMILY Calcium ATPase, transmembrane domain M 377 616 IPR023298 -
Arst9g00909 952 FunFam Probable copper-transporting ATPase HMA5 752 888 - -
Arst9g00909 952 CDD HMA 25 87 IPR006121 GO:0046872
Arst9g00909 952 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 15 947 - -
Arst9g00909 952 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 15 947 - -
Arst9g00909 952 Gene3D - 17 88 - -
Arst9g00909 952 CDD HMA 100 162 IPR006121 GO:0046872
Arst9g00909 952 ProSiteProfiles Heavy-metal-associated domain profile. 22 88 IPR006121 GO:0046872
Arst9g00909 952 ProSiteProfiles Heavy-metal-associated domain profile. 96 162 IPR006121 GO:0046872
Arst9g00909 952 FunFam Copper-transporting ATPase HMA5 95 166 - -
Arst9g00909 952 SFLD C1.7: P-type atpase like 606 883 - -
Arst9g00909 952 SFLD C1.7: P-type atpase like 606 883 - -
Arst9g00909 952 SUPERFAMILY HMA, heavy metal-associated domain 20 90 IPR036163 GO:0046872
Arst9g00909 952 PRINTS P-type cation-transporting ATPase superfamily signature 854 866 - -
Arst9g00909 952 PRINTS P-type cation-transporting ATPase superfamily signature 778 788 - -
Arst9g00909 952 PRINTS P-type cation-transporting ATPase superfamily signature 756 767 - -
Arst9g00909 952 PRINTS P-type cation-transporting ATPase superfamily signature 624 638 - -
Arst9g00909 952 PRINTS P-type cation-transporting ATPase superfamily signature 460 474 - -
Arst9g00909 952 PRINTS P-type cation-transporting ATPase superfamily signature 831 850 - -
Arst9g00909 952 Gene3D - 615 881 IPR023214 -
Arst9g00909 952 ProSitePatterns Heavy-metal-associated domain. 102 131 IPR017969 GO:0046872
Arst9g00909 952 CDD P-type_ATPase_Cu-like 265 927 - -
Arst9g00909 952 Gene3D - 635 764 IPR023299 GO:0000166
Arst9g00909 952 FunFam ATPase copper transporting beta 19 93 - -
Arst9g00909 952 NCBIfam heavy metal translocating P-type ATPase 337 940 IPR027256 GO:0006812|GO:0016020|GO:0019829
Arst9g00909 952 PRINTS Copper-transporting ATPase 1 signature 23 48 - -
Arst9g00909 952 PRINTS Copper-transporting ATPase 1 signature 120 141 - -
Arst9g00909 952 PRINTS Copper-transporting ATPase 1 signature 49 72 - -
Arst9g00909 952 PRINTS Copper-transporting ATPase 1 signature 78 98 - -
Arst9g00909 952 SFLD p-type atpase 606 883 IPR044492 -
Arst9g00909 952 SFLD p-type atpase 606 883 IPR044492 -
Arst9g00909 952 Pfam haloacid dehalogenase-like hydrolase 620 845 - -
Arst9g00909 952 FunFam Copper-transporting ATPase 1, putative 392 514 - -
Arst9g00909 952 SUPERFAMILY Calcium ATPase, transduction domain A 424 510 IPR008250 -
Arst9g00909 952 Gene3D - 96 170 - -
Arst9g00909 952 ProSiteProfiles Heavy-metal-associated domain profile. 171 237 IPR006121 GO:0046872
Arst9g00909 952 SUPERFAMILY HMA, heavy metal-associated domain 167 234 IPR036163 GO:0046872
Arst9g00909 952 Pfam Heavy-metal-associated domain 26 85 IPR006121 GO:0046872
Arst9g00909 952 Pfam Heavy-metal-associated domain 99 159 IPR006121 GO:0046872
Arst9g00909 952 ProSitePatterns E1-E2 ATPases phosphorylation site. 626 632 IPR018303 -
Arst9g00909 952 NCBIfam HAD-IC family P-type ATPase 377 908 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst9g00909 952 SUPERFAMILY HMA, heavy metal-associated domain 94 165 IPR036163 GO:0046872
Arst9g00909 952 Pfam E1-E2 ATPase 423 602 - -
Arst9g00909 952 SUPERFAMILY HAD-like 622 937 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00909 Arst-Chr9 9515433 9522702 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00909 18 946 Primary Pumps ATPases AT1G63440 56.397 0.0 1063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00909 K17686 - gmx:100793894 1573.14