Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00904 ATGGACGAAGATCTCGACTTGCCGATGGCGGAGCCTATGAACGACGACTTCGACTTCGCCGGCGGCGGCGGCGTCGGAATGGACGACGATTTCCCCGTTCTCAAGGTCGGAGAGGAGAAGGAAATTGGCAAGCTTGGATTGAAGAAGAAGCTCCTCAAAGAAGGTGAAGGATGGGAGAATCCTGAAGCCGGTGATGAAGTCCAAGTTCACTATACCGGGACTCTGCTTGATGGCACCAAGTTTGATTCCAGCAGAGATAGGGGAGCCCCTTTCACGTTCACACTTGGACAAGGGCAAGTAATTAAAGGATGGGATGAAGGTATTAGAAGCATGAAGAAAGGTGAAAATGCCCTTTTCACCATCCCACCTGAGCTAGCTTATGGTGAATCCGGTTCTCCTCCCACAATTCCGCCCAAAGCAACTCTTCAATTTGATGTTGAGCTGTTGTCTTGGACTAGTGTGAAGGACATATGTAAGGATGGTGGTTTGTTTAAGAAGATACTTGTTGAGGGAGAGAAATGGGAGAACCCTAAGGATCCTGATGAAGTTCTGGTTAATTATGAGGCACGCCTTGAAGATGGAACACTTGTAAAGAAATCTGATGGGGTAGAGTTCACAGTAGAAGACGGTCACTTTTGCCCTGCATTGTCAAAGGCCATCAAAACAATGAAGAAGGGACAAAAAGTAATTTTGACTGTAAAGCCACAATATGGATTTGGCGAGAAGGGTAGGCCAGCCCATGGTGATGAAGGTGCTGTTCCACCAAATGCAACATTGCTGATTACTCTTGAGTTAGTCTCTTGGAAGACAGTGACCAATGTAACTGATGACAAGAAGGTCATGAAAAAGATCCTTACTGAAGGAGAAGGATATGAGCGTCCAAATGAGGGATCCATTGTGAAATTGAAACTTACTGGTAAGCTGCACGATGGCACTATTTTTGTGAAGAAGGGCCATGATGGTGAAGGGGAACTACTTGAATTCAAAACAGATGAGGAGCAAGTAATTGAGGGGCTTGATAAGGCCATGTTGACAATGAAGAAGGGCGAGGTAGCACTGTTGACTATTGCTCCTGAGTATGCGTTTGGTTCATCAGAATCCAAGCAAGAATTGGCAGTTGTTCCACCTGACTCCACTGTGTATTATGAGGTTGAATTAGTATCTTTTGTGAAGGATAAGGAATCTTGGGACATGGAAACTCCAGAGAAAATTGAAGCTGCTGGTAAGAAGAAAGAAGAAGGGAATGCACTGTTTAGAGCTGGTAAATATGCAAAAGCTTCTAAAAGATATGAGAAGGCTATTAAGTTCATAGAATATGATACCAACTTCAGCATTGAAGAGAAGAAGAGTGCCAAGGACTTGAAGATTGCTTGCAATTTGAATGATGCAGCTTGCAAGTTGAAGTTGAAAGATTATAAACAAGCAGAGAAATTGTGTACGAAGGTTTTGGACCTTGAAAGCACAAATGTGAAAGCACTCTATAGAAGAGCACAAGCATATATCCAGTTAGCTGACTTGGATTTGGCAGAATTTGATATCAAGAAAGCACTTGAGATTGACCCTAATAACAGGGATGTTAAGCTAGAGTACAGGATTTTGAAGGAAAAGATGAAGGAGTACAACAGAAAAGAGGCAAAATTTTATGGAAATATGTTCAGCAAAATGACCAAGTTAGAAAAACCTGCCTCCACGGATTCAAAACCCATGAGCATTGACAACAAGGCATAA 1728 0.43 MDEDLDLPMAEPMNDDFDFAGGGGVGMDDDFPVLKVGEEKEIGKLGLKKKLLKEGEGWENPEAGDEVQVHYTGTLLDGTKFDSSRDRGAPFTFTLGQGQVIKGWDEGIRSMKKGENALFTIPPELAYGESGSPPTIPPKATLQFDVELLSWTSVKDICKDGGLFKKILVEGEKWENPKDPDEVLVNYEARLEDGTLVKKSDGVEFTVEDGHFCPALSKAIKTMKKGQKVILTVKPQYGFGEKGRPAHGDEGAVPPNATLLITLELVSWKTVTNVTDDKKVMKKILTEGEGYERPNEGSIVKLKLTGKLHDGTIFVKKGHDGEGELLEFKTDEEQVIEGLDKAMLTMKKGEVALLTIAPEYAFGSSESKQELAVVPPDSTVYYEVELVSFVKDKESWDMETPEKIEAAGKKKEEGNALFRAGKYAKASKRYEKAIKFIEYDTNFSIEEKKSAKDLKIACNLNDAACKLKLKDYKQAEKLCTKVLDLESTNVKALYRRAQAYIQLADLDLAEFDIKKALEIDPNNRDVKLEYRILKEKMKEYNRKEAKFYGNMFSKMTKLEKPASTDSKPMSIDNKA 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00904 575 Pfam Tetratricopeptide repeat 490 523 IPR001440 GO:0005515
Arst9g00904 575 Coils Coil 523 543 - -
Arst9g00904 575 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 297 390 IPR001179 GO:0003755
Arst9g00904 575 FunFam Peptidylprolyl isomerase 270 392 - -
Arst9g00904 575 SUPERFAMILY FKBP-like 275 407 - -
Arst9g00904 575 Gene3D - 156 269 IPR046357 GO:0003755
Arst9g00904 575 SUPERFAMILY TPR-like 397 555 IPR011990 GO:0005515
Arst9g00904 575 SUPERFAMILY FKBP-like 46 157 - -
Arst9g00904 575 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 180 269 IPR001179 GO:0003755
Arst9g00904 575 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 64 152 IPR001179 GO:0003755
Arst9g00904 575 SMART tpr_5 490 523 IPR019734 GO:0005515
Arst9g00904 575 SMART tpr_5 456 489 IPR019734 GO:0005515
Arst9g00904 575 SMART tpr_5 407 440 IPR019734 GO:0005515
Arst9g00904 575 SUPERFAMILY FKBP-like 156 271 - -
Arst9g00904 575 Gene3D - 270 392 IPR046357 GO:0003755
Arst9g00904 575 Gene3D - 40 155 IPR046357 GO:0003755
Arst9g00904 575 FunFam Peptidylprolyl isomerase 37 155 - -
Arst9g00904 575 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 291 387 IPR001179 GO:0003755
Arst9g00904 575 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 175 266 IPR001179 GO:0003755
Arst9g00904 575 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 59 149 IPR001179 GO:0003755
Arst9g00904 575 PANTHER PEPTIDYLPROLYL ISOMERASE 40 153 - -
Arst9g00904 575 FunFam Peptidylprolyl isomerase 395 550 - -
Arst9g00904 575 FunFam Peptidylprolyl isomerase 156 269 - -
Arst9g00904 575 ProSiteProfiles TPR repeat profile. 490 523 IPR019734 GO:0005515
Arst9g00904 575 Gene3D Tetratricopeptide repeat domain 393 550 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00904 Arst-Chr9 9464670 9469207 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00904 29 575 Calmodulin-binding Proteins AT5G48570 76.321 0.0 855
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00904 K09571 - gmx:100803189 935.636