Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00901 TATGAGCTTGGACGCCAGCCAGCCAACACTAAGCTATCGAGCAATAAGACGGTCAGGAGGATTCGTGTTAGAGGTGGCAATGTGAAGTGGAGGGCATTGAGGTTGGATACCGGAAACTATTCATGGGGAAGTGAAGCTGTGACTCGCAAGACTCGTATTCTTGATGTTGTTTACAATGCCTCAAACAATGAGCTCGTGCGAACTCAGACTCTTGTCAAGAGTGCCATTGTTCAGGTTGATGCTGCCCCATTCAAGCAGTGGTACCTTCAGCATTATGGTGTTGATATTGGCAGGAAGAAGAAAACGGCTGCTGCCAAGAAGGATGCTGAGGAAGGTGAGACCCCTGCGGAGGAAGCCAAGAAAAGCAACCATGTGCAGAGAAAAATCGAGAAACGTCAGAAAGATCGTAAGCTTGATCCCCATATTGAAGAGCAGTTTGGTGGTGGGAGATTGCTGGCTTGCATTGCTTCTCGACCTGGTCAATGTGGCAGGGCTGACGGCTATATTTTGGAAGGTAAGGAGCTTGAATTTTACATGAAGAAAATCCAGAAGAAAAAGGGAAAGGGTGCTGCCTAA 576 0.4757 MGISRDSMHKRRATGGKKKVWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTAAAKKDAEEGETPAEEAKKSNHVQRKIEKRQKDRKLDPHIEEQFGGGRLLACIASRPGQCGRADGYILEGKELEFYMKKIQKKKGKGAA 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00901 217 FunFam 40S ribosomal protein S8 32 160 - -
Arst9g00901 217 Gene3D Ribosomal protein S8e, subdomain 108 175 IPR042563 -
Arst9g00901 217 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
Arst9g00901 217 FunFam 40S ribosomal protein S8 161 214 - -
Arst9g00901 217 CDD Ribosomal_S8e_like 5 196 - -
Arst9g00901 217 MobiDBLite consensus disorder prediction 1 22 - -
Arst9g00901 217 PANTHER 40S RIBOSOMAL PROTEIN S8 1 214 IPR001047 GO:0003735|GO:0005840|GO:0006412
Arst9g00901 217 NCBIfam ribosomal protein eS8 1 198 IPR001047 GO:0003735|GO:0005840|GO:0006412
Arst9g00901 217 MobiDBLite consensus disorder prediction 131 167 - -
Arst9g00901 217 Gene3D - 25 212 - -
Arst9g00901 217 Pfam Ribosomal protein S8e 5 196 IPR022309 -
Arst9g00901 217 FunFam 40S ribosomal protein S8 109 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00901 Arst-Chr9 9436537 9438089 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00901 1 205 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 85.366 9.36e-128 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00901 K02995 - rcu:8277586 374.785