Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00779 ATGATGGCAAATCAAGATAGAACTATTATTACCAACGACTATGATCCCGATAAATTAGCGTACGATGTTTTTCTTAGTTTTAGGGGAGAAGACACACGCTACTCCTTCACAGGTTTTCTCTACGATGCTCTATTCAGGAAGGGAGTGAGAGTGTTCATGGATGATGAAGAGTTGAAGGGAGGGGACCGAATCGCGCAATCTCTGGTGAATGCGATCCAGCAATCAAGGATTTCGATTGTTGTTTTCTCTGAGAATTATGCAACTTCAAGGTGGTGCCTTGATGAACTAGTGGAGATCGTTGAGTGTATGGAGTTGAAGAAGCGATTGTTGGTTTGGCCAATCTTTTACAAAGTGGCACCGTCTGATGTGAGGCATCAGAGAAAGAGTTACGCTGAAGCCATGGCTGCACATGAAGAAAGGTTCGGAAATGGATCTGTTAAGGTCCACAAATGGAGATCAGCTTTGTCTCAAGTTGCTAACTTGAAAGGATGGTCTTACCAAACAGGGTATGAATATGAATTTATACATGAGATTGTGAAAAGGGTGACTACTAAATTACAGCATGAACAAGTAAATCTTGGAGAGCACCTAATTGGACACCAGTCTCACATAGAAGAACTGAGGTCACTTTTAGACATTGAATCCCAGAGGACAGTTTGCATGCTAGGAATTTATGGAACAGGAGGAATTGGCAAAACAGCACTTGCCAAAGCTCTTTATAACACAATTTTCCATAAATTTGAATGTTCAATCTTTCTTGAAGGTGTTAGAGAAAGATCAAACAGTTATATGGGCCTAGTAAATCTCCAAGAGGCTATTATATCTAAGCTATATGAAGGGGAAAATATAAAGTTGGAGAATGTTGATGATGGCATCACTAAGTTAAAAGATACATTGAAGCATAAGAGAGTTCTTTTGGTACTGGACGATGTTGATAGCAAGGATCAAATAAGAAATTTGGCAGGCGAGCGCAACTGGTTCGGTTCAGGGAGTAGAATCATCATAACAACGAGGGATAAACATGTGCTAAACATTGATAAGGTTGAAAAGAAATTCGAGATAAAGAGGTTACATGATCATGAAGCTCTTCAACTCTTTTGCTTAAAAGCTTTCAAAATGAATCATCCTTTACCTGAGTATAAAAATGTGTCTAATCATGTAGTTCATTATGCCAAGGGCCTTCCATTAGCTCTAAAAGTATTAGGGTCTCATTTTGCTAATAAATCCATAAGGGAATGTGAATGTGCATTGAAACAATTCAAGAGGATTCAACAGAGGAACATACATGACATACTCAAGGTCAGTTATGATTGCTTAGAAGATGCCACAAAGTGTGTATTTCTTGACATTGCTTGCTTCTTTGAAGGGGCTAGCTTGCAATATGTTGAGAATGTTTTGGAGAAATGTGACCTTTTCCCATCATATAATATAGGAAGACTTGTTGATAAATCTCTGCTAGCTATTGAAAATGATTGCTTAATAATGCATGATCTCATTCAAGACATGGGAATAGAAATTGTTAGGCAAGAAGCACCATCAAAACTTGGTAAACGCAGCAGATTATGTTTTTATGAAGATGTTCTTAGAGTATTGAGGGAAGATTCGGGAAGCAGTAACATTGAAGGAATAATGTTGGACCCTCCTAAAGAAGAAAATGTAATATGGAGCGGCACTGCCTTTCAGAAGATGAATAATATTCGAATTCTGATTGTTCGAAATACACATTTTATACCAGAACCTAGTTATTTGCCGAATAGTCTAAGGTTACTCGAATGGGATAGGTACCCATCAAAATCTCTCCCATCAAATTTTCATCCTAAGAATATTGTTGACCTTAGCTTACCATGCAGTCAACTCAACTTGAAGATGGAAAAATCGTTTCAGTTAACAATGACTGGATGTTCAATTCACTAG 1914 0.3798 MMANQDRTIITNDYDPDKLAYDVFLSFRGEDTRYSFTGFLYDALFRKGVRVFMDDEELKGGDRIAQSLVNAIQQSRISIVVFSENYATSRWCLDELVEIVECMELKKRLLVWPIFYKVAPSDVRHQRKSYAEAMAAHEERFGNGSVKVHKWRSALSQVANLKGWSYQTGYEYEFIHEIVKRVTTKLQHEQVNLGEHLIGHQSHIEELRSLLDIESQRTVCMLGIYGTGGIGKTALAKALYNTIFHKFECSIFLEGVRERSNSYMGLVNLQEAIISKLYEGENIKLENVDDGITKLKDTLKHKRVLLVLDDVDSKDQIRNLAGERNWFGSGSRIIITTRDKHVLNIDKVEKKFEIKRLHDHEALQLFCLKAFKMNHPLPEYKNVSNHVVHYAKGLPLALKVLGSHFANKSIRECECALKQFKRIQQRNIHDILKVSYDCLEDATKCVFLDIACFFEGASLQYVENVLEKCDLFPSYNIGRLVDKSLLAIENDCLIMHDLIQDMGIEIVRQEAPSKLGKRSRLCFYEDVLRVLREDSGSSNIEGIMLDPPKEENVIWSGTAFQKMNNIRILIVRNTHFIPEPSYLPNSLRLLEWDRYPSKSLPSNFHPKNIVDLSLPCSQLNLKMEKSFQLTMTGCSIH 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00779 637 Gene3D - 356 440 IPR042197 -
Arst9g00779 637 Pfam NB-ARC domain 201 439 IPR002182 GO:0043531
Arst9g00779 637 Gene3D - 20 185 IPR035897 -
Arst9g00779 637 PRINTS Disease resistance protein signature 298 312 - -
Arst9g00779 637 PRINTS Disease resistance protein signature 391 405 - -
Arst9g00779 637 PRINTS Disease resistance protein signature 221 236 - -
Arst9g00779 637 Gene3D - 186 353 IPR027417 -
Arst9g00779 637 ProSiteProfiles TIR domain profile. 19 186 IPR000157 GO:0007165
Arst9g00779 637 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 188 - -
Arst9g00779 637 Pfam TIR domain 20 190 IPR000157 GO:0007165
Arst9g00779 637 SUPERFAMILY "Winged helix" DNA-binding domain 427 531 IPR036390 -
Arst9g00779 637 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 164 IPR035897 -
Arst9g00779 637 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 193 450 IPR027417 -
Arst9g00779 637 SMART till_3 20 161 IPR000157 GO:0007165
Arst9g00779 637 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 620 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00779 Arst-Chr9 7404105 7420823 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00779 21 617 WRKY Transcription Factor Family AT4G12020 31.967 1.32e-70 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00779 - - ahf:112712880 1043.11