Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00770 ATGGGTAATCAGAAGCAAAAGTGGACGCAAGATGAAGAAGACGCACTCATCGCTGGCGTGGAAAAACACGGTCCAGGAAAGTGGAAGAACATTCTCAAAGACCCTCAATTCGCACCATTTCTCACTTCACGTTCCAATATCGACCTCAAGGATAAATGGCGGAATTTGAGTGTTAGCAATGGCACTCAAGGGTCCAAGGAAAAATCTAGGGTTCCTAGAATCAAGGCTGCTGCCCCAGTTGCTGCTGCTGCTGCTAGTAATGCTATTGTTGTTGCCGGGGAAGATGCTACTATTGTCACCACTATGATTCATCAACCTGATCCTTCTGTTGCTGTGGGTGATTCTTCTCAAAATGACGAAGATGCCAAGAATCGTCCGAGGTACAATGCAATACAAGGGAAACTTGAAAAGGTACAAAACTGTTACAAGATTAAAAAGGACTATTCACCTGTGCCAAAATCACCAGTTGCTGTGAAAAAGAATGTGTGGCCACAACGGCAACAACCACCACCACCCCCCGAGTTTGTGGCATCTAATGAGACAATAAAGGAAGCTGCTGAAACTGTAGCCTACAGAATTGCCGAGGCCGAAAGCAAGTCATATTTAGCCGCCGAAGCAGTCAAGGAGGCAGAACGAATTGCACGCTTAGCTGAAGATGCTGAGGCGATGTTACAGCTAGTACAACAGATTTATGATGCTTGTTCGCGTGGTGAAGCTGTCATCTTGGCATCTTAA 735 0.4585 MGNQKQKWTQDEEDALIAGVEKHGPGKWKNILKDPQFAPFLTSRSNIDLKDKWRNLSVSNGTQGSKEKSRVPRIKAAAPVAAAAASNAIVVAGEDATIVTTMIHQPDPSVAVGDSSQNDEDAKNRPRYNAIQGKLEKVQNCYKIKKDYSPVPKSPVAVKKNVWPQRQQPPPPPEFVASNETIKEAAETVAYRIAEAESKSYLAAEAVKEAERIARLAEDAEAMLQLVQQIYDACSRGEAVILAS 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00770 244 Pfam Myb-like DNA-binding domain 5 56 IPR001005 -
Arst9g00770 244 SUPERFAMILY Homeodomain-like 2 59 IPR009057 -
Arst9g00770 244 Gene3D - 8 85 - -
Arst9g00770 244 SMART sant 4 59 IPR001005 -
Arst9g00770 244 FunFam Telomere repeat-binding factor 1 2 58 - -
Arst9g00770 244 FunFam Telomere repeat-binding factor 1 8 87 - -
Arst9g00770 244 PANTHER SINGLE MYB HISTONE 4 125 242 IPR044597 GO:0003691
Arst9g00770 244 ProSiteProfiles Myb-like domain profile. 1 57 IPR001005 -
Arst9g00770 244 Coils Coil 203 223 - -
Arst9g00770 244 CDD SANT_TRF 6 56 - -
Arst9g00770 244 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 61 IPR017930 -
Arst9g00770 244 MobiDBLite consensus disorder prediction 106 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00770 Arst-Chr9 7339465 7345026 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00770 1 242 Single Myb Histone (SMH) Gene Family AT1G17520 39.590 3.76e-53 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Arst9g00770 Myb_DNA-binding 1.4e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00770 K09422 - gmx:778177 275.404