Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00766 ATGGGGAGAAGAAACGGGGGAAGGCCACTGTTCGGAACTCTCCGTCGTCGATTGGATTCGTGCAAGTCCCGCTACACCACCGTCGATGACATCGTTAACCACCTCCGCTCCACTTACCCCGATTACCAGCGCACCAAGCAGCAAGCCCTCACTCGATTAGTTCAACAAGTCCTCGAGCCACGTGCCAAACCCGCGGCGCCCAAAGTCTCTCCCACGCGCAGGGTTCATGATGACGACGAAGACGATGACGAAGAAGGAGGTCGAAGCGCGCCGCGAAGGAGACGGAATACAATCGACCAAGGCGAAGAAAGGTTGCAGAAGATGGAGGCTTTGCACCTGCGAAAAAGGATGCAGGGAGAAGAGGAAGCTCAGGGTTCTGCATCTACGTCCTCTGCTTCAAGCTCGAGCGCGTCCGGGAGCAGCGGCAGTGAGGAGGAGGAGGATGATGATGATGATGAAGCAGTATCTATGTCGACATCGGAGGACGCAATTTACGGGGAGAAGTACGAACCTGCTTTCGATTTGATGAAGACGATGCTGCGGAATAAGTACACTCCCAAAAAGGATGATAATGTGAGGAAGAAGAAGCCAGTTGTGGAGGATAAGAACGTTGAATTGGAGGTGGCCAATAATAGCAAGGTTACTAACGAGCTTTGTGCTGTGAACGGAGGCAGAGGCAGAGGCGAAGCGAAAGCTGCTGTGAAGGATGTGAATTCAAAGGGTTCCGTTTCGAATGGCACCGGTGGTGGTGGCAGCGATGTTGAATTGAAACAGAAGACGGGACCCAGGTTCAGTGATTTGGGTGGAATGCAGGATGTTTTGGAGGAGCTGATGGAAGTGATCGTGCCATTGTATCGTTCCGAGTTGCCAAGAGAGCTGGGTGTTACTCCTACTACTGGAATCTTGCTGCATGGGCCACCTGGTTGTGGCAAGACCACACTGGCTCACGCCATAGCTAATGAGACCGGTCTTCCCTTCTATCAGATATCAGCTACTGAATTGGTTTCAGGAGTCTCAGGTGCATCTGAAGAGAATATTAGAGAGCTTTTCACTAAAGCATATAGGACTGCCCCATCAATCGTCTTCATTGATGAGATTGATTCAATTGCTTCGAAAAGAGATAATTTACAACGAGAGATGGAGAAGAGAATTGTAACACAGTTACTGGTTAGCATGGATCAATCAAGTAGCTGTATGCAATCCGCTAATGATTCGGACAGTTCTAAAGTTCATTCTGGCCATGTTCTTGTAATTGGAGCAACAAATAGGCCTGATGCTCTTGACCCGGCCTTGAGAAGGCCTGGGCGGTTTGATCGTGAGATTGTTATGCTTACACGCAATCTTAAACTTGAGGGTTCATTGGATCTTAAACATATAGCAAGATCTACGCCAGGATACGTCAGTGCTGATTTGGTAGCTGTGGTTAAGGAGGCTGGTAATTTGGCAATAAAGAGAATCCTTTCTAGAAGGAAATGGGAACTATCTCAGGGTCTTACAAGGTGTCTTGGAGACTGGTGGAAGGAACCTTGGTCTCATGAAGATGTGGATAAGCTTTTTTGCACAATGTCTGATTTTCAGGAAGCAGTGAAAAAGGTGCAACCTTCATTAAGAAGAGAGGGCTTCTCATCCGTTCCCAATGTGAAATGGGAAGATGTTGGGGGCCTTGATTGTTTAAAGGAGGAGTTTGAATCCAGTATAATAAGGCCGATAAAATATCCCGAGGTTTATCAGACATTTGAGGTGGTAAATGAGACGGGAATTTTGCTTTTTGGGCCCCCTGGTTGCGGTAAAACTCTTATTGCCAAAGCTGTTGCCAACGAGGCAGGAGCTAATTTCATTCATATTAAGGGGCCTGAACTCTTAAATAAATTTGTTGGAGAAAGTGAGCGAGAAGTTCGACGAGTGTTTAGTCGTGCAAGGGCATGTTCACCCTGTATAGTATTTTTTGACGAGGTGGATGCTCTATCAACCAAACGTGATTCGGAAGGTGGATCGGTAGTCGAACGAGTAGTGAACCAGTTACTTATTGAGCTAAATGGTGGTGACCAGCGCCAAGGTGTTTTTGTTATTGGTGCTACAAATAGGCCCGATGTGATGGATGAGGCTCTCCTCCGTTCTGGTAGACTTGGTAAATTTCTTTACGTTCCTGTGCCGAACGCCGACCAGCGATTTTCAATATTGAAAGCTCTTGCAAGGAAGAAGCCTGCTGATTCTACTGTGGATTTGAGAGCCATAGCTGAAGCTTGTGAAAATTTTAGTGGCGCAGACCTTGCTGCATTGATGAATGAAGCAGCTAAAGCTGCTGTCAATGAGAAATTGACCTCAGTTGAAGCTACTAGTGATACTAATACATACATGCCAAGGCATTTTGAGATAGCACTTACTAAAGTCTCTCCCTCCGTGTCTCCCGCGGAAAGGCGAAGGTATGAGCGTTTGGCAGAGCGCTTTAAAGTATCATGA 2460 0.472 MGRRNGGRPLFGTLRRRLDSCKSRYTTVDDIVNHLRSTYPDYQRTKQQALTRLVQQVLEPRAKPAAPKVSPTRRVHDDDEDDDEEGGRSAPRRRRNTIDQGEERLQKMEALHLRKRMQGEEEAQGSASTSSASSSSASGSSGSEEEEDDDDDEAVSMSTSEDAIYGEKYEPAFDLMKTMLRNKYTPKKDDNVRKKKPVVEDKNVELEVANNSKVTNELCAVNGGRGRGEAKAAVKDVNSKGSVSNGTGGGGSDVELKQKTGPRFSDLGGMQDVLEELMEVIVPLYRSELPRELGVTPTTGILLHGPPGCGKTTLAHAIANETGLPFYQISATELVSGVSGASEENIRELFTKAYRTAPSIVFIDEIDSIASKRDNLQREMEKRIVTQLLVSMDQSSSCMQSANDSDSSKVHSGHVLVIGATNRPDALDPALRRPGRFDREIVVGIPDESSREHILTMLTRNLKLEGSLDLKHIARSTPGYVSADLVAVVKEAGNLAIKRILSRRKWELSQGLTRCLGDWWKEPWSHEDVDKLFCTMSDFQEAVKKVQPSLRREGFSSVPNVKWEDVGGLDCLKEEFESSIIRPIKYPEVYQTFEVVNETGILLFGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKFVGESEREVRRVFSRARACSPCIVFFDEVDALSTKRDSEGGSVVERVVNQLLIELNGGDQRQGVFVIGATNRPDVMDEALLRSGRLGKFLYVPVPNADQRFSILKALARKKPADSTVDLRAIAEACENFSGADLAALMNEAAKAAVNEKLTSVEATSDTNTYMPRHFEIALTKVSPSVSPAERRRYERLAERFKVS 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00766 833 MobiDBLite consensus disorder prediction 122 141 - -
Arst9g00766 833 PANTHER AAA-FAMILY ATPASE 135 831 - -
Arst9g00766 833 Gene3D - 446 553 - -
Arst9g00766 833 MobiDBLite consensus disorder prediction 86 103 - -
Arst9g00766 833 Pfam Nucleolin binding domain 19 59 IPR031996 -
Arst9g00766 833 FunFam Ribosome biogenesis ATPase RIX7 252 444 - -
Arst9g00766 833 ProSitePatterns AAA-protein family signature. 415 433 IPR003960 GO:0005524|GO:0016887
Arst9g00766 833 Gene3D - 252 444 IPR027417 -
Arst9g00766 833 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 263 545 IPR027417 -
Arst9g00766 833 SMART AAA_5 297 447 IPR003593 GO:0016887
Arst9g00766 833 SMART AAA_5 597 733 IPR003593 GO:0016887
Arst9g00766 833 FunFam ATPase, AAA family protein 559 737 - -
Arst9g00766 833 Pfam ATPase family associated with various cellular activities (AAA) 601 730 IPR003959 GO:0005524|GO:0016887
Arst9g00766 833 Pfam ATPase family associated with various cellular activities (AAA) 301 443 IPR003959 GO:0005524|GO:0016887
Arst9g00766 833 Pfam AAA+ lid domain 754 792 IPR041569 -
Arst9g00766 833 Pfam AAA+ lid domain 468 501 IPR041569 -
Arst9g00766 833 Gene3D - 732 809 - -
Arst9g00766 833 MobiDBLite consensus disorder prediction 58 103 - -
Arst9g00766 833 ProSitePatterns AAA-protein family signature. 701 719 IPR003960 GO:0005524|GO:0016887
Arst9g00766 833 MobiDBLite consensus disorder prediction 142 157 - -
Arst9g00766 833 MobiDBLite consensus disorder prediction 116 165 - -
Arst9g00766 833 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 559 829 IPR027417 -
Arst9g00766 833 Gene3D - 559 824 IPR027417 -
Arst9g00766 833 MobiDBLite consensus disorder prediction 234 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00766 Arst-Chr9 7193311 7198075 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00766 538 831 Calmodulin-binding Proteins AT3G56690 44.257 2.05e-70 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00766 K14571 - gmx:100809594 966.837