Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00763 ATGGGTAATCAGAAGCAAAAGTGGACGCAAGACGAAGAAGACGCGCTCATAGCCGGCGTGGAAAAACACGGTCCAGGGAAGTGGAAGAACATTCTCAAAGACCCCCAGTTTGCACCATTTCTCACTTCACGTTCCAATATCGACCTCAAGGATAAATGGCGAAATTTGAGTGTTAGCAATGGCACTCAAGGATCTAAGGAAAAATCTAGGGTTCCTAGAATCAAGGGTGGGGCCCCTATTGCTGCTTCCCCAGTTGCTGCTGCTGCTAGTAATGCCATTGTTGTTGCCGGGGAAGATGCTACTATTGTCACCACTATGATTCATCAACCTGATCCTTCTGTTGCTGTGGGTGATTCCTCTCAAAATGACGAAGATGCCAAGAATCGTCCGAGGTACAATGCAATGGTTTTAGAAGCTCTGTCAGCTTTGAAAGATGCTAATGGATCTGACCTGAATGCCATTGTTAACTTTATTGAGGTCAGATTGTTTTTTATCGTAATGTTTTCAATACATCCATATCAAGGGAAACTTGAAAAGGTACAAAACTGTTACAAGATTAAAAAGGACTATTCACCTGTGCCAAAATCACCAGTTGCTGTGAAAAAGAATGTGTGGCCACAACGGCAACAACCACCACCACCCCCCGAGTTTGTGGCATCTAATGAGACAATAAAGGAAGCTGCTGAAACTGCAGCCTACAGAATTGCCGAGGCCGAAAGCAAGTCATATTTAGCCGCCGAAGCAGTCAAGGAGGCAGAACGAATTGCACGCTTAGCTGAAGATGCTGAGGCGATGTTACAGCTAGTACAACAGATTTATGATGCTTGTTCGCGTGGTGAAGCTGTCATCTTGGCATCTTAA 861 0.4495 MGNQKQKWTQDEEDALIAGVEKHGPGKWKNILKDPQFAPFLTSRSNIDLKDKWRNLSVSNGTQGSKEKSRVPRIKGGAPIAASPVAAAASNAIVVAGEDATIVTTMIHQPDPSVAVGDSSQNDEDAKNRPRYNAMVLEALSALKDANGSDLNAIVNFIEVRLFFIVMFSIHPYQGKLEKVQNCYKIKKDYSPVPKSPVAVKKNVWPQRQQPPPPPEFVASNETIKEAAETAAYRIAEAESKSYLAAEAVKEAERIARLAEDAEAMLQLVQQIYDACSRGEAVILAS 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00763 286 FunFam Telomere repeat-binding factor 1 2 58 - -
Arst9g00763 286 SUPERFAMILY "Winged helix" DNA-binding domain 127 197 IPR036390 -
Arst9g00763 286 SUPERFAMILY Homeodomain-like 2 59 IPR009057 -
Arst9g00763 286 ProSiteProfiles Myb-like domain profile. 1 57 IPR001005 -
Arst9g00763 286 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 61 IPR017930 -
Arst9g00763 286 PANTHER SINGLE MYB HISTONE 4 1 284 IPR044597 GO:0003691
Arst9g00763 286 FunFam Telomere repeat-binding factor 1 8 87 - -
Arst9g00763 286 Gene3D - 2 58 - -
Arst9g00763 286 Pfam Myb-like DNA-binding domain 5 56 IPR001005 -
Arst9g00763 286 SMART sant 4 59 IPR001005 -
Arst9g00763 286 Gene3D - 124 162 IPR036388 -
Arst9g00763 286 SMART h15plus2 126 183 IPR005818 GO:0000786|GO:0003677|GO:0006334
Arst9g00763 286 CDD SANT_TRF 6 56 - -
Arst9g00763 286 Pfam linker histone H1 and H5 family 130 159 IPR005818 GO:0000786|GO:0003677|GO:0006334
Arst9g00763 286 Coils Coil 245 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00763 Arst-Chr9 7129949 7132371 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00763 1 284 Single Myb Histone (SMH) Gene Family AT1G17520 45.791 5.22e-69 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Arst9g00763 Myb_DNA-binding 1.9e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00763 K09422 - gmx:778177 318.546