Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00760 ATGGATCATTACAAGGTTCTAGGGTTGCACAAAACCGCATCAAAGGAAGAGATCAAAGCAGCGTTCAAGAAATTGGCGTTTCAATTTCATCCAGACAAGCACTCCCACTCGCCCAAGGTCGTCAGGGACAACGCCACGCTTCGATTCAAGCAGGTTTCTGAGGCTTATGAGGTCCTCATGGACGATCGCAAGCGCGCCGATTACAATTTCCGCTCCCGCTCCACCGCTGCCGGTGGTAGCAGCAGTTACTATTCGCAGTATTCTTACGGATATGGTCGTGGGAGTAGTAGTTACCAACAATGGTCCAGGCATCAATATGGTGGTGGTGGTGGCGGCGGAGGCGGCATTGCTTCGAAGTTTGAGCTTGCTATTCGAATTTTGACGGCGAGATCTTCTCTCCTCAATCTCGGCTTTGCAGCAGCTATATTGGGTGGAATAGTTATCATCGATAAAAGTGGAGAATCTTTGTGGGAAAGGCAAAATTCAGGGAAATCATTTGAAGAAGCCATGAAGTCTATTGATAAGGCCAAAGCATACAGAGAAGATAGCGCGAAGGAACGTACGTGA 567 0.4832 MDHYKVLGLHKTASKEEIKAAFKKLAFQFHPDKHSHSPKVVRDNATLRFKQVSEAYEVLMDDRKRADYNFRSRSTAAGGSSSYYSQYSYGYGRGSSSYQQWSRHQYGGGGGGGGGIASKFELAIRILTARSSLLNLGFAAAILGGIVIIDKSGESLWERQNSGKSFEEAMKSIDKAKAYREDSAKERT 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00760 188 SMART dnaj_3 1 64 IPR001623 -
Arst9g00760 188 ProSitePatterns Nt-dnaJ domain signature. 49 68 IPR018253 -
Arst9g00760 188 CDD DnaJ 2 61 IPR001623 -
Arst9g00760 188 Gene3D DnaJ domain 1 118 IPR036869 -
Arst9g00760 188 SUPERFAMILY Chaperone J-domain 1 75 IPR036869 -
Arst9g00760 188 PANTHER CO-CHAPERONE PROTEIN DJLA 4 104 - -
Arst9g00760 188 ProSiteProfiles dnaJ domain profile. 2 72 IPR001623 -
Arst9g00760 188 Pfam DnaJ domain 2 69 IPR001623 -
Arst9g00760 188 PRINTS DnaJ domain signature 44 64 IPR001623 -
Arst9g00760 188 PRINTS DnaJ domain signature 94 113 IPR001623 -
Arst9g00760 188 PRINTS DnaJ domain signature 4 22 IPR001623 -
Arst9g00760 188 PRINTS DnaJ domain signature 22 37 IPR001623 -
Arst9g00760 188 FunFam DnaJ domain protein 1 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00760 Arst-Chr9 7109440 7112644 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00760 3 69 C2H2 Transcription Factor Family AT1G74250 41.791 2.35e-11 60.1