Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00744 ATGGACACTACTCCGGCGAGGTTCATGTTGAGCTACGGTGGCGAGATCAAGCCCCGCGACGGCCACCACCACCGCTCCTCCTATGCTGGCGGCGTCCACAAGATGTTCCACGTTGACGGCAACATAAACTTCGACGATATGACCGCCAAGCTCTCCTTACTCAAGGGCGGCGATGCTGTAACCTCCTTTAAGTATCTCATCCCCGGCGACGACCTCGATACCCTGGTCACTGTCGACAACGAGATGGACCTCAGTAACCTTATGAGCGAATACGATCTGCACTGCCACGGTTCCGGTTGGCTCGCCCCGATGAGGATCTTTCTCGACACCGTCGAACAAGGCGGCGTCGCTGTTGTTCCTCAGGCACCTGTTCCGCCGAGTGCCTCTGACGAGGATCGCGTGAACATGGAGCTGGAGGGTCAGTTGGAGCAGCAGTGGGGGCGCGTTTCGGGTCGCGCGTCGTTCTCTTTGCCCGGACCGTTAACTCTTGCATCGGCGCTCTTCTTACTCGTTGCCCTGATTCTTCTTGTTTTGCTACCGATGGCACTTCTCATACTTCAAAACTATTCAATTAAGAACGCAATGACCGAGATCAGGAGCACAGAACCTCCTCGCGACAGGCTTATTCAATTCGAGAAGTCCATCAATCAATTACCTGAAGTACTGGTCCCCGCTAGGGATACCATTGAAATGGTGTTGCATGATAAAAAGGGTAGCAGAATACATGCTTCTCTCCCAAAGGCATTGGTCAAGAAGTTTTGTCCAGTTGCTAAAATCATACAAAATGGCAATATAGATGACAAGGAACTCATTGATATAATTGTTGAGGTGGTTGGAAACAAGGGAAGACAAATTGTCTTTACTTTTGAGGATTTGGACAAAAATAGGGTGACCTGTATTTTGTTTGGAACACTGGTGGATCATATTTTTCCCCACCTTGATTCAATTGGTCCTGCACCACTCATTGTTGAGAGGGCTAAAAGTTTCTTAGACAAGGTGCATGTTCAGAGCAGTTACTATGCATCAAAGCTCCATGTGAACGTCTACATAAAAGAAGTTGTGGATTCCAAAAATAGGTTGGGGAGTACTTGCCAGATTACTTCGCAGTATATAAGTCATCTCTCATCTCAACCTAGCTATTCCGAGAGTGATGAGATTAATGGCGGATTAGTAAGATTGAAGTCAATAGAGGAGCTTCTGAATTGTGCAAATGAGGGTTCTTATTGGATTCTGGCTAGCATAGTGCGTTTGGATGTTGAAAAAGATGATTGGTTTTACAAGGGATGTACCAGATGTCCCCGGAAGCTAGAAGGTGCTGAACCATCTTATTGCAAGAAATGTGATCAAGCGGATTCCAATCCTCTTCTACGGTTTAGGTTTCAAGTGATAGTGTCTGATGGCACTGGAAGAATAATATTATTGGTTCTGTGGGATAGGGAAACCCTGCAAATTGTTGGGAAGACAGCAACAGAGATAAAAGAAAACTTTTTTGATGATGATGATGCAGATACAAAGCTTCTGATTAAAGTTGCTGTGTCATCAAGGAACATTAACGGTTATGATGATGTCTATAATGTTATGAGGATATCCGATGATGAACAATTGATTGCAAAATTTGGCCGTAATGCTGCTGATTCAGTTGATGATGAGTTTCATACAACTTCTAGTTAG 1671 0.4548 MDTTPARFMLSYGGEIKPRDGHHHRSSYAGGVHKMFHVDGNINFDDMTAKLSLLKGGDAVTSFKYLIPGDDLDTLVTVDNEMDLSNLMSEYDLHCHGSGWLAPMRIFLDTVEQGGVAVVPQAPVPPSASDEDRVNMELEGQLEQQWGRVSGRASFSLPGPLTLASALFLLVALILLVLLPMALLILQNYSIKNAMTEIRSTEPPRDRLIQFEKSINQLPEVLVPARDTIEMVLHDKKGSRIHASLPKALVKKFCPVAKIIQNGNIDDKELIDIIVEVVGNKGRQIVFTFEDLDKNRVTCILFGTLVDHIFPHLDSIGPAPLIVERAKSFLDKVHVQSSYYASKLHVNVYIKEVVDSKNRLGSTCQITSQYISHLSSQPSYSESDEINGGLVRLKSIEELLNCANEGSYWILASIVRLDVEKDDWFYKGCTRCPRKLEGAEPSYCKKCDQADSNPLLRFRFQVIVSDGTGRIILLVLWDRETLQIVGKTATEIKENFFDDDDADTKLLIKVAVSSRNINGYDDVYNVMRISDDEQLIAKFGRNAADSVDDEFHTTSS 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00744 556 SUPERFAMILY CAD & PB1 domains 26 110 - -
Arst9g00744 556 PANTHER OS05G0427100 PROTEIN-RELATED 6 139 - -
Arst9g00744 556 Gene3D - 379 539 IPR012340 -
Arst9g00744 556 Pfam PB1 domain 25 108 IPR000270 GO:0005515
Arst9g00744 556 Pfam Replication factor-A C terminal domain 419 513 IPR013955 -
Arst9g00744 556 CDD RPA1_DBD_C 393 532 IPR047192 -
Arst9g00744 556 SMART PB1_new 5 98 IPR000270 GO:0005515
Arst9g00744 556 SUPERFAMILY Nucleic acid-binding proteins 394 531 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00744 Arst-Chr9 7001248 7005706 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00744 7 115 MAP Kinase Kinase Kinase AT5G57610 38.393 4.36e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00744 - - ahf:112710177 608.986