Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00743 ATGGACACTACTCCGGCGAGGTTCATGTTGAGCTACGGTGGCGAGATCAAGCCCCGCGACGGCCACCACCACCGCTCCTCCTATGCTGGCGGCGTCCACAAGATGTTCCACGTTGACGGCAACATAAACTTCGACGATATGACCGCCAAGCTCTCCTTACTCAAGGGCGGCGATGCTGTAACCTCCTTTAAGTATCTCATCCCCGGCGACGACCTCGATACCCTGGTCACTGTCGACAACGAGATGGACCTCAGTAACCTTATGAGCGAATACGATCTGCACTGCCACGGTTCCGGTTGGCTCGCCCCGATGAGGATCTTTCTCGACACCGTCGAACAAGGCGGCGTCGCTGTTGTTCCTCAGGCACCTGTTCCGCCGAGTGCCTCTGACGAGGATCGCGTGAACATGGAGCTGGAGGGTCAGTTGGAGCAGCAGTGGGGGCGCGTTTCGGGTCGCGCGTCGTTCTCTTTGCCCGGACCGTTAACTCTTGCATCGGCGCTCTTCTTACTCGTTGCCCTGATTCTTCTTGTTTTGCTACCGATGGCACTTCTCATACTTCAAAACTATTCAATTAAGAACGCAATGACCGAGATCAGGAGCACAGAACCTCCTCGCGACAGGCTTATTCAATTCGAGAAGTCCATCAATCAATTACCTGAAGTACTGCAGGTCCCCGCTAGGGATACCATTGAAATGGTGTTGCATGATAAAAAGGGTAGCAGAATACATGCTTCTCTCCCAAAGGCATTGGTCAAGAAGTTTTGTCCAGTTGCTAAAATCATACAAAATGGCAATATAGATGACAAGGAACTCATTGATATAATTGTTGAGGTGGTTGGAAACAAGGGAAGACAAATTGTCTTTACTTTTGAGGATTTGGAGGTGACCTGTATTTTGTTTGGAACACTGGTGGATCATATTTTTCCCCACCTTGATTCAATTGGTCCTGCACCACTCATTGTTGAGAGGGCTAAAAGTTTCTTAGACAAGGTGCATGTTCAGAGCAGTTACTATGCATCAAAGCTCCATGTGAACGTCTACATAAAAGAAGTTGTGGATTCCAAAAATAGGTTGGGGAGTACTTGCCAGATTACTTCGCAGTATATAAGTCATCTCTCATCTCAACCTAGCTATTCCGAGAGTGATGAGATTAATGGCGGATTAGTAAGATTGAAGTCAATAGAGGAGCTTCTGAATTGTGCAAATGAGGGTTCTTATTGGATTCTGGCTAGCATAGTGCGTTTGGATGTTGAAAAAGATGATTGGTTTTACAAGGGATGTACCAGATGTCCCCGGAAGCTAGAAGGTGCTGAACCATCTTATTGCAAGAAATGTGATCAAGCGGATTCCAATCCTCTTCTACGGTTTAGGTTTCAAGTGATAGTGTCTGATGGCACTGGAAGAATAATATTATTGGTTCTGTGGGATAGGGAAACCCTGCAAATTGTTGGGAAGACAGCAACAGAGATAAAAGAAAACTTTTTTGATGATGATGATGCAGATACAAAGCTTCTGATTAAAGTTGCTGTGTCATCAAGGAACATTAACGGTTATGATGATGTCTATAATGTTATGAGGATATCCGATGATGAACAATTGATTGCAAAATTTGGCCGTAATGCTGCTGATTCAGTTGATGATGAGTTTCATACAACTTCTAGTTAG 1665 0.4565 MDTTPARFMLSYGGEIKPRDGHHHRSSYAGGVHKMFHVDGNINFDDMTAKLSLLKGGDAVTSFKYLIPGDDLDTLVTVDNEMDLSNLMSEYDLHCHGSGWLAPMRIFLDTVEQGGVAVVPQAPVPPSASDEDRVNMELEGQLEQQWGRVSGRASFSLPGPLTLASALFLLVALILLVLLPMALLILQNYSIKNAMTEIRSTEPPRDRLIQFEKSINQLPEVLQVPARDTIEMVLHDKKGSRIHASLPKALVKKFCPVAKIIQNGNIDDKELIDIIVEVVGNKGRQIVFTFEDLEVTCILFGTLVDHIFPHLDSIGPAPLIVERAKSFLDKVHVQSSYYASKLHVNVYIKEVVDSKNRLGSTCQITSQYISHLSSQPSYSESDEINGGLVRLKSIEELLNCANEGSYWILASIVRLDVEKDDWFYKGCTRCPRKLEGAEPSYCKKCDQADSNPLLRFRFQVIVSDGTGRIILLVLWDRETLQIVGKTATEIKENFFDDDDADTKLLIKVAVSSRNINGYDDVYNVMRISDDEQLIAKFGRNAADSVDDEFHTTSS 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00743 554 SUPERFAMILY CAD & PB1 domains 26 110 - -
Arst9g00743 554 Pfam PB1 domain 25 108 IPR000270 GO:0005515
Arst9g00743 554 CDD RPA1_DBD_C 391 530 IPR047192 -
Arst9g00743 554 Gene3D - 377 537 IPR012340 -
Arst9g00743 554 Pfam Replication factor-A C terminal domain 417 511 IPR013955 -
Arst9g00743 554 PANTHER OS05G0427100 PROTEIN-RELATED 6 139 - -
Arst9g00743 554 SUPERFAMILY Nucleic acid-binding proteins 392 529 IPR012340 -
Arst9g00743 554 SMART PB1_new 5 98 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00743 Arst-Chr9 7001247 7005706 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00743 7 115 MAP Kinase Kinase Kinase AT5G57610 38.393 4.41e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00743 - - ahf:112710177 602.438