Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00742 ATGGACACTACTCCGGCGAGGTTCATGTTGAGCTACGGTGGCGAGATCAAGCCCCGCGACGGCCACCACCACCGCTCCTCCTATGCTGGCGGCGTCCACAAGATGTTCCACGTTGACGGCAACATAAACTTCGACGATATGACCGCCAAGCTCTCCTTACTCAAGGGCGGCGATGCTGTAACCTCCTTTAAGTATCTCATCCCCGGCGACGACCTCGATACCCTGGTCACTGTCGACAACGAGATGGACCTCAGTAACCTTATGAGCGAATACGATCTGCACTGCCACGGTTCCGGTTGGCTCGCCCCGATGAGGATCTTTCTCGACACCGTCGAACAAGGCGGCGTCGCTGTTGTTCCTCAGGCACCTGTTCCGCCGAGTGCCTCTGACGAGGATCGCGTGAACATGGAGCTGGAGGGTCAGTTGGAGCAGCAGTGGGGGCGCGTTTCGGGTCGCGCGTCGTTCTCTTTGCCCGGACCGTTAACTCTTGCATCGGCGCTCTTCTTACTCGTTGCCCTGATTCTTCTTGTTTTGCTACCGATGGCACTTCTCATACTTCAAAACTATTCAATTAAGAACGCAATGACCGAGATCAGGAGCACAGAACCTCCTCGCGACAGGCTTATTCAATTCGAGAAGTCCATCAATCAATTACCTGAAGTACTGCAGGTCCCCGCTAGGGATACCATTGAAATGGTGTTGCATGATAAAAAGGGTAGCAGAATACATGCTTCTCTCCCAAAGGCATTGGTCAAGAAGTTTTGTCCAGTTGCTAAAATCATACAAAATGGCAATATAGATGACAAGGAACTCATTGATATAATTGTTGAGGTGGTTGGAAACAAGGGAAGACAAATTGTCTTTACTTTTGAGGATTTGGACAAAAATAGGGTGACCTGTATTTTGTTTGGAACACTGGTGGATCATATTTTTCCCCACCTTGATTCAATTGGTCCTGCACCACTCATTGTTGAGAGGGCTAAAAGTTTCTTAGACAAGGTGCATGTTCAGAGCAGTTACTATGCATCAAAGCTCCATGTGAACGTCTACATAAAAGAAGTTGTGGATTCCAAAAATAGGTTGGGGAGTACTTGCCAGATTACTTCGCAGTATATAAGTCATCTCTCATCTCAACCTAGCTATTCCGAGAGTGATGAGATTAATGGCGGATTAGTAAGATTGAAGTCAATAGAGGAGCTTCTGAATTGTGCAAATGAGGGTTCTTATTGGATTCTGGCTAGCATAGTGCGTTTGGATGTTGAAAAAGATGATTGGTTTTACAAGGGATGTACCAGATGTCCCCGGAAGCTAGAAGGTGCTGAACCATCTTATTGCAAGAAATGTGATCAAGCGGATTCCAATCCTCTTCTACGGTTTAGGTTTCAAGTGATAGTGTCTGATGGCACTGGAAGAATAATATTATTGGTTCTGTGGGATAGGGAAACCCTGCAAATTGTTGGGAAGACAGCAACAGAGATAAAAGAAAACTTTTTTGATGATGATGATGCAGATACAAAGCTTCTGATTAAAGTTGCTGTGTCATCAAGGAACATTAACGGTTATGATGATGTCTATAATGTTATGAGGATATCCGATGATGAACAATTGATTGCAAAATTTGGCCGTAATGCTGCTGATTCAGTTGATGATGAGTTTCATACAACTTCTAGTTAG 1674 0.4552 MDTTPARFMLSYGGEIKPRDGHHHRSSYAGGVHKMFHVDGNINFDDMTAKLSLLKGGDAVTSFKYLIPGDDLDTLVTVDNEMDLSNLMSEYDLHCHGSGWLAPMRIFLDTVEQGGVAVVPQAPVPPSASDEDRVNMELEGQLEQQWGRVSGRASFSLPGPLTLASALFLLVALILLVLLPMALLILQNYSIKNAMTEIRSTEPPRDRLIQFEKSINQLPEVLQVPARDTIEMVLHDKKGSRIHASLPKALVKKFCPVAKIIQNGNIDDKELIDIIVEVVGNKGRQIVFTFEDLDKNRVTCILFGTLVDHIFPHLDSIGPAPLIVERAKSFLDKVHVQSSYYASKLHVNVYIKEVVDSKNRLGSTCQITSQYISHLSSQPSYSESDEINGGLVRLKSIEELLNCANEGSYWILASIVRLDVEKDDWFYKGCTRCPRKLEGAEPSYCKKCDQADSNPLLRFRFQVIVSDGTGRIILLVLWDRETLQIVGKTATEIKENFFDDDDADTKLLIKVAVSSRNINGYDDVYNVMRISDDEQLIAKFGRNAADSVDDEFHTTSS 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00742 557 Pfam Replication factor-A C terminal domain 420 514 IPR013955 -
Arst9g00742 557 SUPERFAMILY CAD & PB1 domains 26 110 - -
Arst9g00742 557 CDD RPA1_DBD_C 394 533 IPR047192 -
Arst9g00742 557 PANTHER OS05G0427100 PROTEIN-RELATED 6 139 - -
Arst9g00742 557 Gene3D - 380 540 IPR012340 -
Arst9g00742 557 Pfam PB1 domain 25 108 IPR000270 GO:0005515
Arst9g00742 557 SMART PB1_new 5 98 IPR000270 GO:0005515
Arst9g00742 557 SUPERFAMILY Nucleic acid-binding proteins 395 532 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00742 Arst-Chr9 7001247 7005706 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00742 7 115 MAP Kinase Kinase Kinase AT5G57610 38.393 4.37e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00742 - - ahf:112710177 615.535