Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00738 ATGGATACTACGCCGGCGAGGTTTAAGTGCAGCTACGGCGGCGAGATCAGGCACCACGACGACGAACACCACCGCTACCCCTACTATGCTGGCGGCATCCACAGGATGCTCCAAGTTCAAGGCGACATAAATTTTGCTGTTATGACCGCCGAGCTCTCCTTACTCTGCGGCGGCGCTGCCGTAACCTCCTTTAAGTACCTTATCCCCGGCGACGACCTCGACACCCTGGTCACCGTCTCCGATGACAGGGACTTCTGTTACCTTATGCGCGAATACGATCTGCACTACCGCGGTTCCGGTTCTCTCGACCCGATGAGGATCTTCCTCGACATCGTCGAACAAGGCGGCGGCGCTGTTGCTCCTCAGGCACCTGCCCCGCTGAGTGCCTCCGACGAGGATCGATGCGTGAACATGGAGCTGGAGGGTCAATTGGAGACGCAGTGGGGGCGCGTGGGAGGTCGCGTTTCGTTTTCTTTTCCCGGGCCGTTGACTCCTGCATCGGCCCTCATACTCTTCGCTCTGATTCTTCTTCTTTCGCTACCAATCGCATTCGTACTTCAAAATTATTTAGTTACGAATGCTGTTGCAGAGTTCAGGGACTTTGAACATCATCGTGACGGGATTATTCACTTTGAGAAGCACATGAATCAATTACCTGGAGCATTGGAGGTTCCCGCTAAGGATACCATTGAAATGGTGTTGCATGATAAAAAGGGTAGCAGAATACATGCTTCTCTCCCAAAGGCATTGGTCAAGAAGTTTTGTCCTGTTGCTAACATCATACAAAACGGCAATATAGATGACAAGGAACTCATTGATATATTTGTTGAGGTGGTTGGTAACAAGGGAAGACAAATTGTCTTTACTTTTGAGGATTTGGACAAAAATAGGGTGACCTGTATTTTGTTTGGAACACTAGTGGATCATATTCTTCCCCACCTTGATTCAATTGGTCCTGGACCACTCATTGTTGCTAAAAGTTTCTTAGACAAGGTGCATGTTCAGAGCAGTTACTATGCATCAAAGCTCCATGTGAACGTCTACATAAAAGAAGTTGTGGATTCCAAAAATAGGTTGGGGAGTACTTGCCAGATTACTTCGCAGTATATAAGTCATCTCTCATCTCAACCTAGCTATTCCGAGAGTGATGAGATTAATGGCGGATTAGTAAGATTGAAGTCAATAGAGGAGCTTCTGAATTGTGCAAATGAGGGTTCTTATTGGATTCTGGCTAGCATAGTGCGTTTGGATGTTGAAAAAGATGATTGGTTTTACAAGGGATGTACCAGATGTCCCCGGAAGCTAGAAGGTGCTGAACCATCTTATTGCAAGAAATGTGATCAAGCGGATTCCAATCCTCTTCTACGGTTTAGGTTTCAAGTGATAGTGTCTGATGGCACTGGAAGAATAATATTATTGGTTCTGTGGGATAGGGAAACCCTGCAAATTGTTGGGAAGACAGCAACAGAGATAAAAGAAAACTTTTTTGATGATGATGATGCAGATACAAAGCTTCTGATTAAAGTTGCTGTGTCATCAAGGAACATTAACGGTTATGATGATGTCTATAATGTTATGAGGATATCCGATGATGAACAATTGATTGCAAAATTTGGCCGTAATGCTGCTGATTCAGTTGATGATGAGTTTCATACAACTTCTAGTTAG 1668 0.4538 MDTTPARFKCSYGGEIRHHDDEHHRYPYYAGGIHRMLQVQGDINFAVMTAELSLLCGGAAVTSFKYLIPGDDLDTLVTVSDDRDFCYLMREYDLHYRGSGSLDPMRIFLDIVEQGGGAVAPQAPAPLSASDEDRCVNMELEGQLETQWGRVGGRVSFSFPGPLTPASALILFALILLLSLPIAFVLQNYLVTNAVAEFRDFEHHRDGIIHFEKHMNQLPGALEVPAKDTIEMVLHDKKGSRIHASLPKALVKKFCPVANIIQNGNIDDKELIDIFVEVVGNKGRQIVFTFEDLDKNRVTCILFGTLVDHILPHLDSIGPGPLIVAKSFLDKVHVQSSYYASKLHVNVYIKEVVDSKNRLGSTCQITSQYISHLSSQPSYSESDEINGGLVRLKSIEELLNCANEGSYWILASIVRLDVEKDDWFYKGCTRCPRKLEGAEPSYCKKCDQADSNPLLRFRFQVIVSDGTGRIILLVLWDRETLQIVGKTATEIKENFFDDDDADTKLLIKVAVSSRNINGYDDVYNVMRISDDEQLIAKFGRNAADSVDDEFHTTSS 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00738 555 PANTHER OS05G0427100 PROTEIN-RELATED 6 136 - -
Arst9g00738 555 Pfam PB1 domain 28 109 IPR000270 GO:0005515
Arst9g00738 555 SMART PB1_new 5 112 IPR000270 GO:0005515
Arst9g00738 555 Gene3D - 378 538 IPR012340 -
Arst9g00738 555 SUPERFAMILY CAD & PB1 domains 25 110 - -
Arst9g00738 555 SUPERFAMILY Nucleic acid-binding proteins 393 530 IPR012340 -
Arst9g00738 555 Pfam Replication factor-A C terminal domain 418 512 IPR013955 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00738 Arst-Chr9 6938062 7005706 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00738 7 116 MAP Kinase Kinase Kinase AT5G57610 38.053 1.47e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00738 - - ahf:112710177 460.299