Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00716 ATGGGTGATATGCAAAACGATGGGACTTGTACGGGGATAGGGTGTTGTAAGGTGGATATTCCTCCTCTTGCAATGAAGAACAATAACATCAGCATAGAGGCGAATAGCTTCTCCAATTTCAACACATCATGGGGATTCAACAACTGCAGCTACTCCTTTATAGCCAAAAAGGGTGGCTACAGATTTTCAGTGAGTCATTTGATGAAGGGGGTAGCGTTAGAGGGGGTTCCCATGGTTGTTGATTGGAGCGTTGGGGAATACGGTTGTGAAGTTTCCCGCAAGGACTTGTCTGGGTATGTATGCAGGGGTAATAGCAGTTGCGAGGATTCCAAGACTGGATATGGCTACCAATGCACATGTAACAAAGGCTTTGAGGGAAACCCCTACCATCCCGAAGGTTGCCGAGATGTTGAAGAATGCAAGAACTATAACACCCATAACTGCATTAGTGAAAATCATTGCCGTGAAACTGAAGGGTCATTCGAGTGCTTTTGTCCTGCTGGGGAATCTGGAGATGGAAAAAGGGAAGGTAAAGGATGCCATCCAAGTGTTGTACGCACGAGGGTTGCAATAACTGGTTTGGGCGTTGGACTTTTGATTCTGATTTTAGGAGCTTCTTGCATATGCCTGATGTATCGGAAAAGGAAACTAATCCAATTGAAATACAAGTTCTTTGAACAAAACGGTGGTCTCGATTTACAAGAAAAGCTTTTCCATGCTAAAATCTTCACTGCAGAGCAACTTATGAAGGCCACCTGCAACTTTGATGAGAGACTAATCATTGGTACAGGACATAACAGTACGGTTTTCAAAGGAATTTTGTCCAATAATAGGGTTGTTGCTATCAAGAAGTTCAGGGAACTAGATCAGAGCCTAATCGAGGAATTCGTTGATAGGTTGGTCCTTCTAGAACAAATCAGACACAAGAATGTGGTCCCCATATTGGGTTGTTGTTTAGAGAGTGAAATTCCTTTTCTGGTTTATGAATTTTGCGATAATGCTACCCTTTTTGACAACCTACACAAGGAAGACAAGATCGAATTATCATGGAAAATTCGTCTACAGATAGCAATAGAGGTAGCTAGAGCTCTAGAGTATTTGCACTCGAGTGTCGCAATAATACCAATCATCCACGCAAATGTCACGAGTGCCAACATTCTGCTTGATGACACTAATACTGCCAAATTACTATTTGATTTTACTTCAATGTATCAAGTTGATTATTTGGACCCGGAGTATTTTCACATACGGCAATTTACCGAGAAAAGTGATGTGTATAGTTTTGGGGTTGTTCTTGCAGAATTGATAATAGGGGATAAACCAATTAATGTTGAGAATCCAAAAGGGGAATTTCCCCTTCTTGCTAAGCAGTTCATCTTAACTTTGGAAAAGAATTGCCGGCTTGATATTCTTGAAACTGGCATTGTGAATAAAGAAAATGAGGAGGAAATCATCCAAGTTGCTCTACTTGCAGCAAAGTGTTTGAGACTTCATGCAAAAGAAAGGCCTAGCATGGGAATGGTTGCAGTGGAGTTGGAGAATATAAGAGAGAAGCATCAAATCAAACGCAATTCAGACCTAAGTTTGACCAAGAGTCTTCACTTGTTTGATGATACATTTGAGCATGGCAATAGTAGCACTAGCAGTGTCCAAAACAGTGGCTACGAATCATGTACCGATTCAATGTAA 1689 0.4121 MGDMQNDGTCTGIGCCKVDIPPLAMKNNNISIEANSFSNFNTSWGFNNCSYSFIAKKGGYRFSVSHLMKGVALEGVPMVVDWSVGEYGCEVSRKDLSGYVCRGNSSCEDSKTGYGYQCTCNKGFEGNPYHPEGCRDVEECKNYNTHNCISENHCRETEGSFECFCPAGESGDGKREGKGCHPSVVRTRVAITGLGVGLLILILGASCICLMYRKRKLIQLKYKFFEQNGGLDLQEKLFHAKIFTAEQLMKATCNFDERLIIGTGHNSTVFKGILSNNRVVAIKKFRELDQSLIEEFVDRLVLLEQIRHKNVVPILGCCLESEIPFLVYEFCDNATLFDNLHKEDKIELSWKIRLQIAIEVARALEYLHSSVAIIPIIHANVTSANILLDDTNTAKLLFDFTSMYQVDYLDPEYFHIRQFTEKSDVYSFGVVLAELIIGDKPINVENPKGEFPLLAKQFILTLEKNCRLDILETGIVNKENEEEIIQVALLAAKCLRLHAKERPSMGMVAVELENIREKHQIKRNSDLSLTKSLHLFDDTFEHGNSSTSSVQNSGYESCTDSM 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00716 562 Gene3D Laminin 89 180 - -
Arst9g00716 562 CDD EGF_CA 136 172 - -
Arst9g00716 562 SUPERFAMILY Protein kinase-like (PK-like) 238 516 IPR011009 -
Arst9g00716 562 MobiDBLite consensus disorder prediction 543 562 - -
Arst9g00716 562 ProSitePatterns Protein kinases ATP-binding region signature. 261 284 IPR017441 GO:0005524
Arst9g00716 562 SMART egf_5 139 181 IPR000742 -
Arst9g00716 562 SMART egf_5 88 135 IPR000742 -
Arst9g00716 562 Pfam Protein tyrosine and serine/threonine kinase 260 509 IPR001245 GO:0004672|GO:0006468
Arst9g00716 562 Gene3D Phosphorylase Kinase; domain 1 224 330 - -
Arst9g00716 562 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 9 519 IPR045274 GO:0007166
Arst9g00716 562 ProSiteProfiles Protein kinase domain profile. 255 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g00716 562 SMART egfca_6 136 181 IPR001881 GO:0005509
Arst9g00716 562 Gene3D Transferase(Phosphotransferase) domain 1 332 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00716 Arst-Chr9 6509334 6530839 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00716 10 557 Receptor kinase-like Gene Family AT1G21230 40.345 3.54e-127 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Arst9g00716 PK_Tyr_Ser-Thr 1e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00716 - - adu:107464318 1143.64