Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Arst9g00715 | ATGTCTTCCTCCGGCAGAAAGCACGACGTTTTCCTTAGCTTCAGAGGCGAAGACACACGTGTCGGCTTCACAAGCCATCTGCATAGTGCTCTTGATCGGAACCAAATCGACACATACATAGATTATAATCTCAGAAAGGGAGAACAAGTTTGGCCCAAACTATCCGAAGCAATCGAGGGCTCACGTCTCGCCATCGTGGTTTTCTCTGAGAATTATGCCTCTTCAAAGTGGTGTATGGAAGAGTTGGTTAAGATAATGGAGTGCAGAAAATTAGAGGGGCTTGTAGTGATACCTGTGTTCTATGAGACTGATCCTTCGGACGTAAGGAACCAAACAGGGACTTACGACAAAGCGTTGGCAAAGCTTGAGAGAGATCTTGGAAGTGCCCTCAGATTCAAGGTGCATAAGTGGAAGGCTGCTCTCACTGAAGCTGCCAACTTATGTGGATGGGACTCTCGCACACACAGGGACAATTCTGAACTTATTCAGAACATTGTTAATGACGTTCTGCAAAAATTGTACCTGAGATACCCTAATGAAATAGAAAGGCTCATTGGAAATGACAAAGCCAGGACAGACATTGAATCATTATTGGAAAAAGTTCAAGTAATTGGAATATGGGGCATGGGGGGTATAGGCAAGACAACCATTGCAAAAGCTGTGTTTGCCAAACACTTTCCTCAACATGAAAGTTCATGCTTCTTGGCCAATGTAAGAGAAGAATGGACAAAGCTTGGACCAACACATTTACGTGATAAGCTTATCTATGACATACTGAAGGAACATATTCCCTCATCTAATGTTGTAGGATCCACATTCATCAACCGCAGGGTCCTTAGTAAAAAGGTCCTCATTGTTCTTGATGATGTGGATAGTGTTGAGCAATTAGAGTATTTGTGTGGAGATCATGGTGACCTTGGACCAGATAGCAAACTCATTATAACAACAAGAGATAGACAGATGCTTGTGGGAAGAGTTGATGAAATATATGAACTCAAGGGATTGAACTTTCAAGAATCTCTAACTCTTTTTTCCTTGAATGCCTTCAAGGTAAAGTACCCTGAAGAGGGATATAAACATCTCTCAGAAAGGGTAGTTGATTATGCCGGTGGAGTTCCATTAGCTCTAAAGGTTTTGGGTTCATATCTTTATAAGAAGAGTAGAGTGTTTTGGGAAAATGCATTGAAAAAATTGAGAGATTATCCTAATTTGAAAATTCAAAGTGTGTTAAAAGTGAGCTATGATGGATTAGACGAGCTAGAGAAAGACATATTTCTAGATATTGCATTCTTTTTCAAGGGAAAAGATAAAGATTATGTCATAAAGATATTAGATGCTTGTGGTTTCTACACGGCACTTGGAATAGATGTTCTTGTGAATAAAGCTCTTTTAACAGTATCTTATAACAATAGACTTCAAATGCATGACTTGCTAGAGGAAATGGGTTTGGATATAGTTCGTCATGAATGTGAGAAAGACCCTGGAAGATGCAGTCGACTGCGAAATATTAAAGAAGTTTATGATGTCCTTAAAAATAACAAGGGGACTGACAGAATTCAAGGCATAGCATTAGATTTATCTGAAGTTCAAGATTTGTACTTGGAGGCTGATACATTTAGCATGATGATCAATTTAAGATTCCTTAGATTCCATCTTCCTTCGGGTAGGAGATCAGCTGATGTGTTCCACCCTAGAGCCCTCAAGTCATTTTCTGAAAAATTGAGGTACTTTGAGTGGCATGGATACCCCTTTAAGTCTCTTCCACCTAATTTCTGTGCTAAGTTGCTTGTTGAGATTCGCATGCCGTGGAGCAATGTTAAAGAACTTTGGCAGGGGATTCAAGACCTTGTGAATTTGGAGGGCATTGATCTGAGTGAATGCAAACAACTGATAAAGCTTCCAGATTTATCCAGGGCATCAAAGCTTAAATGGGTGTATCTCTCGGGCTGCGAAAATTTGTGTGTTGTTCATCCATCTGTTTTGAGTTTGGATACACTTGTGACTTTGATATTAGATGGATGCAAAAAATTGAAGAGCCTTAAAGGTGAAAAGCATTTAGCATCTTTGGAGAAGATCAGTGTCAATGGCTGCTCAAGTCTCAGGGAATTTTCAGTGTCATCGGATTTAATTGAAAGGCTGGATTTGAGTAACACCGGAATCCAAATGTTGCACTCATCAATCGGGCATCTACACAAACTTGTGTGGCTCAATCTAGAAGGTCTAAGACTTAAGAATCTTCCAAATGAGTTATCTTCCTTGAGATTTCTTGAGGAGCTTAGGATTTCTAACTGCATACAAGTAATTGACAAACAAAAACTCCATATTTTATGTGATGGCTTAGAATCTTTGAAAATACTGCATTTGAAGTATTGTGACAAATTGTCTGAACTACCTGATAACATCGATCGCTTATCGAAGTTAAATGAATTAAGACTAGATGGAAGCAGTGTGGAGAGGCTGCCGACAAGCATCAAGAATCTTCAACAACTAGAGATTCTGTCCTTAAAGAATTGTAGGAAGCTCCGGTTTCTAGCAGAGCTTCCACCATTCATCAAAGAGTTTTGTGCTGATAACTGCACATCATTGGTGGCAGTATCCACTTTGGCGAGTTTTGCAGCAAAAATGAAGGGAAAGAAGAAACTCATTTCATTCAAGAATTGCATGAAACTGGATAGACGCTCACACCAGCGCATTATAGAAGCAGCACAATTAATAATGATGAGTGCTTCATATTATGATGTAATATTAAGGTGGTACAGTGCAGATGCACAAAACTACATCTGTAACAATGTTGAAGTTTGTTTAGTAGGAAGCAATATCCCAAAGCAGTTCAAATATCGAACAACATCCTCCTCCATTGCCATTCTACTTCCAACGCAATACAACATGCCAGGTTTCATTTACTCTCTGGTTCTTTCTCCATCTCATGAAATGAAGAAGCATGGAGTTAAAATCCAATGTCAATGTTACTTGGCAGATGGTAAAGAGATTGGGAATACAAGTACATGGCATTACAATGCCATCAGGGATTTGAATTCGGATCACATTTTTGCATGGTATGATCCACTCCATTGGGACAGCATTTGCAGG | 3090 | 0.3955 | MSSSGRKHDVFLSFRGEDTRVGFTSHLHSALDRNQIDTYIDYNLRKGEQVWPKLSEAIEGSRLAIVVFSENYASSKWCMEELVKIMECRKLEGLVVIPVFYETDPSDVRNQTGTYDKALAKLERDLGSALRFKVHKWKAALTEAANLCGWDSRTHRDNSELIQNIVNDVLQKLYLRYPNEIERLIGNDKARTDIESLLEKVQVIGIWGMGGIGKTTIAKAVFAKHFPQHESSCFLANVREEWTKLGPTHLRDKLIYDILKEHIPSSNVVGSTFINRRVLSKKVLIVLDDVDSVEQLEYLCGDHGDLGPDSKLIITTRDRQMLVGRVDEIYELKGLNFQESLTLFSLNAFKVKYPEEGYKHLSERVVDYAGGVPLALKVLGSYLYKKSRVFWENALKKLRDYPNLKIQSVLKVSYDGLDELEKDIFLDIAFFFKGKDKDYVIKILDACGFYTALGIDVLVNKALLTVSYNNRLQMHDLLEEMGLDIVRHECEKDPGRCSRLRNIKEVYDVLKNNKGTDRIQGIALDLSEVQDLYLEADTFSMMINLRFLRFHLPSGRRSADVFHPRALKSFSEKLRYFEWHGYPFKSLPPNFCAKLLVEIRMPWSNVKELWQGIQDLVNLEGIDLSECKQLIKLPDLSRASKLKWVYLSGCENLCVVHPSVLSLDTLVTLILDGCKKLKSLKGEKHLASLEKISVNGCSSLREFSVSSDLIERLDLSNTGIQMLHSSIGHLHKLVWLNLEGLRLKNLPNELSSLRFLEELRISNCIQVIDKQKLHILCDGLESLKILHLKYCDKLSELPDNIDRLSKLNELRLDGSSVERLPTSIKNLQQLEILSLKNCRKLRFLAELPPFIKEFCADNCTSLVAVSTLASFAAKMKGKKKLISFKNCMKLDRRSHQRIIEAAQLIMMSASYYDVILRWYSADAQNYICNNVEVCLVGSNIPKQFKYRTTSSSIAILLPTQYNMPGFIYSLVLSPSHEMKKHGVKIQCQCYLADGKEIGNTSTWHYNAIRDLNSDHIFAWYDPLHWDSICR | 1030 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Arst9g00715 | 1030 | Gene3D | - | 2 | 173 | IPR035897 | - | |
| Arst9g00715 | 1030 | Gene3D | Ribonuclease Inhibitor | 709 | 895 | IPR032675 | - | |
| Arst9g00715 | 1030 | Gene3D | Ribonuclease Inhibitor | 498 | 708 | IPR032675 | - | |
| Arst9g00715 | 1030 | Pfam | NB-ARC domain | 197 | 415 | IPR002182 | GO:0043531 | |
| Arst9g00715 | 1030 | SMART | till_3 | 7 | 147 | IPR000157 | GO:0007165 | |
| Arst9g00715 | 1030 | Pfam | TIR domain | 7 | 174 | IPR000157 | GO:0007165 | |
| Arst9g00715 | 1030 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 173 | 428 | IPR027417 | - | |
| Arst9g00715 | 1030 | Gene3D | - | 174 | 327 | IPR027417 | - | |
| Arst9g00715 | 1030 | SUPERFAMILY | L domain-like | 474 | 849 | - | - | |
| Arst9g00715 | 1030 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 2 | 150 | IPR035897 | - | |
| Arst9g00715 | 1030 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 336 | 418 | - | - | |
| Arst9g00715 | 1030 | PRINTS | Disease resistance protein signature | 825 | 841 | - | - | |
| Arst9g00715 | 1030 | PRINTS | Disease resistance protein signature | 277 | 291 | - | - | |
| Arst9g00715 | 1030 | PRINTS | Disease resistance protein signature | 369 | 383 | - | - | |
| Arst9g00715 | 1030 | PRINTS | Disease resistance protein signature | 203 | 218 | - | - | |
| Arst9g00715 | 1030 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 4 | 175 | - | - | |
| Arst9g00715 | 1030 | Gene3D | - | 334 | 418 | IPR042197 | - | |
| Arst9g00715 | 1030 | ProSiteProfiles | TIR domain profile. | 6 | 173 | IPR000157 | GO:0007165 | |
| Arst9g00715 | 1030 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 8 | 705 | IPR044974 | GO:0006952 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Arst9g00715 | Arst-Chr9 | 6503736 | 6508323 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Arst9g00715 | 3 | 810 | WRKY Transcription Factor Family | AT4G12020 | 32.970 | 3.33e-107 | 366 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Arst9g00715 | - | - | lja:Lj3g3v2665420.1 | 1157.9 |