Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00697 ATGACGGCAAAGGCCAGTGAATACGAGGAGATTCGCCGGAAGAGGTTGGAGGAGAACAAGAAGAGGATGGAGGCCCTCAATCTCCCCAACCTCTCTCAGGCCCTCCACTCCTCTCCCCTTTCCAAATCCAAATCACACTCTCCCTCTCCGCTGAAGCGCGTCAAGTCACGCACCATTGAGAAGCAGGTGGTTGTGGTGAGGAGGTCCAGCCGCGTCGCCAACATGCCAGCTCCTGTTTACAAAGAAGTGGTTATTGATCGTGTAGTCACACCTAGAAGCCGCAGATATGGCGGCTCCTACGATCGCTACAGGGATTATTCAAAGCGGGTGTATGCTTCCGATGAAGCTAGACAGGAAGCCCTAGACAAGGCCGATAAGATACAATCCGATTTGCAGTCTAAGTCTCATCATCCATCCTTCGTTAAAACCATGCTCCAGTCTCACGTCACCGGCGGATTCTGGCTGGGTCTTTCAGTCCAGTTCTGTAAGACGCATCTTCCAAATCGTGACGAAAGAATTACTTTGATTGATGAGGATGGGGATGAGTATGAAACACTATATTTGGCTCGAAAAACAGGACTTAGTGCAGGATGGAGAGGCTTTTCAATTGCTCATAACCTAGTTGATGGGGATGCTTTGGTTTTTGAACTAATTAGCCGCACTACATTCAAGGTTTACATTATTAGAGTGAATAGTCCTGCAGAGGGTGAAGAGCAATGA 720 0.4861 MTAKASEYEEIRRKRLEENKKRMEALNLPNLSQALHSSPLSKSKSHSPSPLKRVKSRTIEKQVVVVRRSSRVANMPAPVYKEVVIDRVVTPRSRRYGGSYDRYRDYSKRVYASDEARQEALDKADKIQSDLQSKSHHPSFVKTMLQSHVTGGFWLGLSVQFCKTHLPNRDERITLIDEDGDEYETLYLARKTGLSAGWRGFSIAHNLVDGDALVFELISRTTFKVYIIRVNSPAEGEEQ 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00697 239 SUPERFAMILY DNA-binding pseudobarrel domain 133 231 IPR015300 -
Arst9g00697 239 Gene3D - 112 232 IPR015300 -
Arst9g00697 239 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 43 233 IPR044837 -
Arst9g00697 239 MobiDBLite consensus disorder prediction 30 47 - -
Arst9g00697 239 ProSiteProfiles B3 DNA-binding domain profile. 140 231 IPR003340 GO:0003677
Arst9g00697 239 SMART B3_2 140 231 IPR003340 GO:0003677
Arst9g00697 239 MobiDBLite consensus disorder prediction 20 55 - -
Arst9g00697 239 Pfam B3 DNA binding domain 140 229 IPR003340 GO:0003677
Arst9g00697 239 Coils Coil 6 26 - -
Arst9g00697 239 CDD B3_DNA 138 229 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00697 Arst-Chr9 6337475 6339062 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00697 8 237 B3 DNA Binding Superfamily AT3G19184 54.348 2.55e-68 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Arst9g00697 B3 2e-14 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00697 - - gmx:100794327 298.901