Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g00680 ATGGAAGCTTTAGAAACCTTCTGCAGAGCCTCTGGGATGAAGGTCAATGTGGAGAAATCTAAAGCGCTATGCTCTAGGAATGTTTCGGCGACAAGAAAAGAGATTCACCGGAGTGTCTTCCATCAGATTCGTCAAGAACTTGGACAATGGAAACTTGAGAATATCTATTCTCCTCTGAATCAGTCTCTGCAGAACTATATATTAACTCTTACAACGTGGATGTTCAAGCTAGTTCAGAGGTCGGTTGGTGTTGGACTGGTGCAGTTTCAAAGGACGGAGGCTGAGATCATTGAAGGGATAATCCGAATGGTTGTGCAGAAATTGAATCACAAATATACAAATGAACTCAGAAGTCCTTTTATTCGAGATCAAAACTATGCATGCATTGAAGCTCTTCTGAAAATGCAATCAAGGGAAGTTCAAATCATTGGAATCTGGGGCATGGGCGGTATAGGTAAAACAACCCTTGCTGCTGCAATTTTCAAAGAGTTCTCTTCCAAATTTGAGGCTAGTTGTTTTTTGGAAAATGTAAGAGAAGAATCATCAAATCATGGACTCAATCACATATTCAAGAAACTCCTTTCTGATTTGCTGGAGGAAAAGGTTCATATTAGCACTCCCAAAGTAATATCCTCAGCAATCATAAGTAGATTAAGGCGTAAGAAAGTTTTCATTGTACTAGATGATGTCCATACTTCTGAACTCTTAGAAACTTTGCTTGGGGTTGGCCATGATTATCTAGGATTTGGTAGCAAAGTGATTGTGACAACCAGAGATAAGCATGTGCTTCAGGGAAGAGTGATCATACATCACATTCATGGAGTAAAAGAAATGAATTTTGAGAACTCCCTTAAACTTTTCAGCTTAAATGCCTTCAACAAGCATTGTCCAGAAACTGAATATTTGGATCTATCAATGATAGCAGTTGCTTATGCAAGTGGCATCCCTTTAGCTTTGAAAGTTTTGGGATCTTTTCTGAGATCAAAAAGTTATCATGAATGGGAGAGTGCATTGGCAAAACTGAAAGAAGTTCCCAATGGAGATATCCAGAAGGTATTGAGATGGAGTTTTCATGAATTGGATGATACAGAAAAAAATATATTTCTTGACATTGCTTGTTTTTTCAAAGGGCAAAACCGATATAAAGTAACAAGGTTATTGAATGCCTGTGGTTTCTTTGCGGAGATAGGGATAAGAACCCTTTTAGACAAGGCTTTGATAAGAATAACAATCAATGATAGTATACAAATGCATGATTTGATACAGGAAATGGGTCATAAAATTGTCGATGAAGAGTCCATTAAGAACCCAGGAGGACGTAGTGGGTTGTGGAAATCTGAAGAAGTTCGAGACATATTGAAAAATAACAAAGGGACTGATGCAATTGAAACAATATTCTTGGATATGACTCAAAACACTGATGAGCTGTGCATAAGTTCCCAGGCATTTAGGAAGATGCCAAACCTAAGGTTACTTGCTCTTGCAGATAATAAAGCTTTTCAGAGGAAGAAGAAGAGAACTAATGAGACACTAGACCTTCCAACAAATCTTGAGTTGCCTAATAATTTGAGATATATCCAGTGGGATGGTTGTCCATTGAAATCTCTAACAACTAGTTGGCCTAGTAAGCTTGTTCAGCTTTCCATGCCATACAGCAACGTTGAAAAACTTTGGGATGGGGAACAGATTTAA 1692 0.3818 MEALETFCRASGMKVNVEKSKALCSRNVSATRKEIHRSVFHQIRQELGQWKLENIYSPLNQSLQNYILTLTTWMFKLVQRSVGVGLVQFQRTEAEIIEGIIRMVVQKLNHKYTNELRSPFIRDQNYACIEALLKMQSREVQIIGIWGMGGIGKTTLAAAIFKEFSSKFEASCFLENVREESSNHGLNHIFKKLLSDLLEEKVHISTPKVISSAIISRLRRKKVFIVLDDVHTSELLETLLGVGHDYLGFGSKVIVTTRDKHVLQGRVIIHHIHGVKEMNFENSLKLFSLNAFNKHCPETEYLDLSMIAVAYASGIPLALKVLGSFLRSKSYHEWESALAKLKEVPNGDIQKVLRWSFHELDDTEKNIFLDIACFFKGQNRYKVTRLLNACGFFAEIGIRTLLDKALIRITINDSIQMHDLIQEMGHKIVDEESIKNPGGRSGLWKSEEVRDILKNNKGTDAIETIFLDMTQNTDELCISSQAFRKMPNLRLLALADNKAFQRKKKRTNETLDLPTNLELPNNLRYIQWDGCPLKSLTTSWPSKLVQLSMPYSNVEKLWDGEQI 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g00680 563 Gene3D - 101 268 IPR027417 -
Arst9g00680 563 Gene3D Ribonuclease Inhibitor 455 561 IPR032675 -
Arst9g00680 563 Pfam Leucine Rich Repeat 543 562 IPR011713 -
Arst9g00680 563 PRINTS Disease resistance protein signature 142 157 - -
Arst9g00680 563 PRINTS Disease resistance protein signature 217 231 - -
Arst9g00680 563 PRINTS Disease resistance protein signature 312 326 - -
Arst9g00680 563 PRINTS Disease resistance protein signature 484 500 - -
Arst9g00680 563 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 62 557 IPR044974 GO:0006952
Arst9g00680 563 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 117 371 IPR027417 -
Arst9g00680 563 Gene3D - 278 361 IPR042197 -
Arst9g00680 563 SUPERFAMILY "Winged helix" DNA-binding domain 348 454 IPR036390 -
Arst9g00680 563 Pfam NB-ARC domain 128 351 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g00680 Arst-Chr9 6178816 6183084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g00680 73 562 WRKY Transcription Factor Family AT4G12020 34.483 4.22e-74 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g00680 - - adu:107464299 1117.45